RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CDKL3Q8IVW4 592 aaPredicted RBP25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 CCDC117Q8IWD4 279 aaPredicted RBP25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 CCDC26Q8TAB7 109 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 ZNF419Q96HQ0 510 aaPredicted RBP25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 BRD9Q9H8M2 597 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 ATP13A1Q9HD20 1204 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 KIAA1522Q9P206 1035 aaPredicted RBP25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 VPS28Q9UK41 221 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 ZSCAN5CA6NGD5 496 aaPredicted RBP25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 CBX4O00257 560 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 JAMLQ86YT9 394 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 CCDC13Q8IYE1 715 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 PLCD3Q8N3E9 789 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 SLC44A3Q8N4M1 653 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 CHFRQ96EP1 664 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 TSGA13Q96PP4 275 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 ACE2Q9BYF1 805 aaPredicted RBP25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 DMGDHQ9UI17 866 aaKnown RBP25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 NYNRINQ9P2P1 1898 aaKnown RBP25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 TRIOO75962 3097 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 CACNG3O60359 315 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 PEX11BO96011 259 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 CCNCP24863 283 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 STIP1P31948 543 aaKnown RBP25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 VPS41P49754 854 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 ERCC6LQ2NKX8 1250 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 SLCO2A1Q92959 643 aa25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 DNAJC17Q9NVM6 304 aaKnown RBP25.26■■□□□ 1.63
LDLRAD3-203ENST00000528989 CLCN6P51797 869 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 WASHC5Q12768 1159 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 ZBTB17Q13105 803 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 PPP1R7Q15435 360 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 TRADDQ15628 312 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 LINGO4Q6UY18 593 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 MAATS1Q7Z4T9 603 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 ETFBKMTQ8IXQ9 262 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 TAB3Q8N5C8 712 aaPredicted RBP25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 CCDC110Q8TBZ0 833 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 USP33Q8TEY7 942 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 FBXO10Q9UK96 956 aa25.25■■□□□ 1.63
LDLRAD3-203ENST00000528989 KDELR3O43731 214 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 TULP3O75386 442 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 CISD3P0C7P0 127 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 GJA4P35212 333 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 SOX9P48436 509 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 DHX34Q14147 1143 aaKnown RBP25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 ZNF783Q6ZMS7 281 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 LRRC49Q8IUZ0 686 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 CPA6Q8N4T0 437 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 GRK7Q8WTQ7 553 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 TRIM31Q9BZY9 425 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 BRD8Q9H0E9 1235 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 SP110Q9HB58 689 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 FEZ2Q9UHY8 353 aaPredicted RBP25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 GGA2Q9UJY4 613 aa25.24■■□□□ 1.63
LDLRAD3-203ENST00000528989 RNF103O00237 685 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 MATN3O15232 486 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 PRAMEF11O60813 436 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 JCHAINP01591 159 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 KRT14P02533 472 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 CCNB1P14635 433 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 PTPN3P26045 913 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 TERF1P54274 439 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 OXCT1P55809 520 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 ARF5P84085 180 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 LMNB2Q03252 620 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 SLC10A7Q0GE19 358 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 GEN1Q17RS7 908 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 PLEKHG6Q3KR16 790 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 FUT11Q495W5 492 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 TMEM215Q68D42 235 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 CCDC89Q8N998 374 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 ZMPSTE24O75844 475 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 DGKGP49619 791 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 PITRM1Q5JRX3 1037 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 SFTPA1Q8IWL2 248 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 RUNDC3BQ96NL0 473 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 XPO6Q96QU8 1125 aaKnown RBP25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 PDFQ9HBH1 243 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 VPS51Q9UID3 782 aa25.23■■□□□ 1.63
LDLRAD3-203ENST00000528989 KIF26AQ9ULI4 1882 aaPredicted RBP25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 ESYT3A0FGR9 886 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 CD160O95971 181 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 GAS8O95995 478 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 MT-CO1P00395 513 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 PABPC1P11940 636 aaKnown RBP25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 ETFBP38117 255 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 CTSOP43234 321 aaPredicted RBP25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 IL10RBQ08334 325 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 NR1H3Q13133 447 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 ITPRIPL2Q3MIP1 535 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 PUS10Q3MIT2 529 aaKnown RBP25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 ADIPOR2Q86V24 386 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 ZNF567Q8N184 647 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 UBXN4Q92575 508 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 RTP4Q96DX8 246 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 AGAP3Q96P47 875 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 HPCAL4Q9UM19 191 aa25.22■■□□□ 1.63
LDLRAD3-203ENST00000528989 MYO10Q9HD67 2058 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms