RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CLCN6P51797 869 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 SFMBT2Q5VUG0 894 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 OR8D1Q8WZ84 308 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 OMDQ99983 421 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 GTPBP2Q9BX10 602 aaKnown RBP33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 MIR1-1HGQ9H1L0 117 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 FSCN3Q9NQT6 498 aa33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 DNAAF2Q9NVR5 837 aaKnown RBP33.87■■■■□ 3.01
SSSCA1-205ENST00000527920 CXorf51AA0A1B0GTR3 108 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 A0A1W2PP55 124 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 GOT1P17174 413 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 PSMD8P48556 350 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 MINDY1Q8N5J2 469 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 FAM131CQ96AQ9 280 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 BIRC7Q96CA5 298 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 MCEEQ96PE7 176 aa33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 TPX2Q9ULW0 747 aaKnown RBP33.86■■■■□ 3.01
SSSCA1-205ENST00000527920 A0A0D9SEW6 157 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 C10orf142B7Z368 130 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 MCF2LO15068 1137 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 SNAP91O60641 907 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 RNASEH2AO75792 299 aaKnown RBP33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 IL1BP01584 269 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 SRCP12931 536 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 RRM1P23921 792 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 FANCCQ00597 558 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 SKOR2Q2VWA4 1001 aaPredicted RBP33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 UAP1L1Q3KQV9 507 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 ACCSLQ4AC99 568 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 FAM46CQ5VWP2 391 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 AADATQ8N5Z0 425 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 CNPY3Q9BT09 278 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 NEUROG2Q9H2A3 272 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 HAUS4Q9H6D7 363 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 TAS2R14Q9NYV8 317 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 DOCK4Q8N1I0 1966 aa33.85■■■■□ 3.01
SSSCA1-205ENST00000527920 ASCC3Q8N3C0 2202 aaKnown RBP33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 LRRC72A6NJI9 287 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 OPHN1O60890 802 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 GZMAP12544 262 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 CD27P26842 260 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 ETFBP38117 255 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 MAPKAPK2P49137 400 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 GALCP54803 685 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 GRIK2Q13002 908 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 SEMA3BQ13214 749 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 E4F1Q66K89 784 aaPredicted RBP33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 KIAA0895LQ68EN5 471 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 Q6ZVU0 165 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 HDDC3Q8N4P3 179 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 CCDC185Q8N715 623 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 OR2T34Q8NGX1 318 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 SNX19Q92543 992 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 PPM1HQ9ULR3 514 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 NEU3Q9UQ49 428 aa33.84■■■■□ 3.01
SSSCA1-205ENST00000527920 CCP110O43303 1012 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 MT-CO1P00395 513 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 PLEKP08567 350 aaPredicted RBP33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 CEACAM1P13688 526 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 RHOQP17081 205 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 DESP17661 470 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 PBX1P40424 430 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 AFF3P51826 1226 aaKnown RBP33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 AIF1P55008 147 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 RPL7AP62424 266 aaKnown RBP33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 SLC20A2Q08357 652 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 SLC14A1Q13336 389 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 ZSCAN23Q3MJ62 389 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 DCUN1D2Q6PH85 259 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 ZNF571Q7Z3V5 609 aaPredicted RBP33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 NLRP14Q86W24 1093 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 ATP11CQ8NB49 1132 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 CCDC114Q96M63 670 aa33.83■■■■□ 3.01
SSSCA1-205ENST00000527920 NYNRINQ9P2P1 1898 aaKnown RBP33.82■■■■□ 3.01
SSSCA1-205ENST00000527920 A0A1W2PQJ5 194 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 GOLGA6L19H0YKK7 550 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 SLC7A4O43246 635 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 GJB3O75712 270 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 LRIG2O94898 1065 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 FSBPO95073 299 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 IGHV4-34P06331 123 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 NOVA1P51513 510 aaKnown RBP33.82■■■■□ 3
SSSCA1-205ENST00000527920 GNA12Q03113 381 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 PLEKHA7Q6IQ23 1121 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 RETSATQ6NUM9 610 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 SLFN11Q7Z7L1 901 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 OR7D4Q8NG98 312 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 TBC1D31Q96DN5 1066 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 IQCDQ96DY2 449 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 PARVAQ9NVD7 372 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 TMEM248Q9NWD8 314 aa33.82■■■■□ 3
SSSCA1-205ENST00000527920 FARP1Q9Y4F1 1045 aaPredicted RBP33.82■■■■□ 3
SSSCA1-205ENST00000527920 C1QTNF3-AMACRE9PGA6 284 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 FAM72CH0Y354 149 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 ZMPSTE24O75844 475 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 L1CAMP32004 1257 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 DRD3P35462 400 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 UBASH3AP57075 661 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 KLHL30Q0D2K2 578 aa33.81■■■■□ 3
SSSCA1-205ENST00000527920 FAM72AQ5TYM5 149 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms