RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 KRT86O43790 486 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 TNNT1P13805 278 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 GLDCP23378 1020 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 KDELR1P24390 212 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 PLA2G5P39877 138 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 STK19P49842 368 aaPredicted RBP13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ST8SIA6P61647 398 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ZNF528Q3MIS6 628 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 PARP15Q460N3 678 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ANKRD20A8PQ5CZ79 823 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 AFMIDQ63HM1 303 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 TSSK4Q6SA08 328 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 VSIG1Q86XK7 387 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 LZTR1Q8N653 840 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 PRSS33Q8NF86 280 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 FAF2Q96CS3 445 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 FAM122AQ96E09 287 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ZNF670Q9BS34 389 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ATP13A1Q9HD20 1204 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 POLMQ9NP87 494 aaPredicted RBP13.23□□□□□ -0.29
SMPD1-202ENST00000526280 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 DDX56Q9NY93 547 aaKnown RBP13.23□□□□□ -0.29
SMPD1-202ENST00000526280 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 RAD54BQ9Y620 910 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 CACNA1HO95180 2353 aa13.23□□□□□ -0.29
SMPD1-202ENST00000526280 MUC22E2RYF6 1773 aaPredicted RBP13.23□□□□□ -0.29
SMPD1-202ENST00000526280 CXorf51AA0A1B0GTR3 108 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 ZNF487B1APH4 448 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 RASA4BC9J798 803 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 CBX4O00257 560 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 RASA4O43374 803 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 KDELR3O43731 214 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 ATP9BO43861 1147 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SYNCRIPO60506 623 aaKnown RBP13.22□□□□□ -0.29
SMPD1-202ENST00000526280 PALMO75781 387 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 APBB3O95704 486 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 MT-CO1P00395 513 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 EPHX1P07099 455 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SP9P0CG40 484 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 HLA-EP13747 358 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 NNMTP40261 264 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 ARF5P84085 180 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 TCF15Q12870 199 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SERINC3Q13530 473 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 CAMK2GQ13555 558 aaPredicted RBP13.22□□□□□ -0.29
SMPD1-202ENST00000526280 HNRNPA1L2Q32P51 320 aaKnown RBP13.22□□□□□ -0.29
SMPD1-202ENST00000526280 RETSATQ6NUM9 610 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 KIAA1211LQ6NV74 962 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 TMCO3Q6UWJ1 677 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 NPWQ8N729 165 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 PCDH19Q8TAB3 1148 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 NELL1Q92832 810 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 HMCESQ96FZ2 354 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 HHIPQ96QV1 700 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 FAM126AQ9BYI3 521 aaPredicted RBP13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SLC39A8Q9C0K1 460 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SUN2Q9UH99 717 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 PYCARDQ9ULZ3 195 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 HPCAL4Q9UM19 191 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 GUCA1BQ9UMX6 200 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 PPP2R2CQ9Y2T4 447 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
SMPD1-202ENST00000526280 CKAP5Q14008 2032 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 CCDC163A0A0D9SF12 145 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 LRRD1A4D1F6 860 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 TTC34A8MYJ7 566 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 KRT1P04264 644 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 NRLP54845 237 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 DMWDQ09019 674 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 STARD3Q14849 445 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 LINGO4Q6UY18 593 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 NT5DC3Q86UY8 548 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 RASSF3Q86WH2 238 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 KATNAL2Q8IYT4 538 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 SYCE1Q8N0S2 351 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 SH2D3CQ8N5H7 860 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 ZNF366Q8N895 744 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 FRS2Q8WU20 508 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 KRT35Q92764 455 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 CELF6Q96J87 481 aaKnown RBP13.21□□□□□ -0.29
SMPD1-202ENST00000526280 RNF157Q96PX1 679 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 PRSS16Q9NQE7 514 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMPD1-202ENST00000526280 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 CAPN6Q9Y6Q1 641 aa13.21□□□□□ -0.29
SMPD1-202ENST00000526280 EDDM13A0A1B0GTR0 161 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 TCRBV21S2A2A0A5A6 115 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 TARSL2A2RTX5 802 aaKnown RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ZSCAN5CA6NGD5 496 aaPredicted RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ARHGAP42A6NI28 874 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 H0Y858 1186 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms