RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 LILRA4P59901 499 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 GALNT2Q10471 571 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 KLF10Q13118 480 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 CUL3Q13618 768 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 ANO4Q32M45 955 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 IQSEC1Q6DN90 963 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 ZYG11AQ6WRX3 759 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 ATG14Q6ZNE5 492 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 FRMD7Q6ZUT3 714 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 CMC1Q7Z7K0 106 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 RSPH3Q86UC2 560 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 KBTBD6Q86V97 674 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 KCNMB4Q86W47 210 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 KLHDC8BQ8IXV7 354 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 ST13P4Q8IZP2 240 aaPredicted RBP8.47□□□□□ -1.05
CHD7-202ENST00000524602 SLC25A41Q8N5S1 370 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 TDRD5Q8NAT2 981 aaKnown RBP8.47□□□□□ -1.05
CHD7-202ENST00000524602 TSNARE1Q96NA8 513 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 LBHD1Q9BQE6 289 aaPredicted RBP8.47□□□□□ -1.05
CHD7-202ENST00000524602 CENPKQ9BS16 269 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 TCF7L2Q9NQB0 619 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 CNGB3Q9NQW8 809 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 MRGBPQ9NV56 204 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 PIH1D1Q9NWS0 290 aaKnown RBP8.47□□□□□ -1.05
CHD7-202ENST00000524602 C6orf203Q9P0P8 240 aaPredicted RBP8.47□□□□□ -1.05
CHD7-202ENST00000524602 FBXW11Q9UKB1 542 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 GJD2Q9UKL4 321 aa8.47□□□□□ -1.05
CHD7-202ENST00000524602 GABRDO14764 452 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 DCXO43602 365 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 FAM200BP0CF97 657 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 GNAT1P11488 350 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 SMPD1P17405 629 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 GTF2A2P52657 109 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 NME3Q13232 169 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 MED21Q13503 144 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 PRPSAP1Q14558 356 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 ZNF618Q5T7W0 954 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 LIPMQ5VYY2 423 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CWF19L1Q69YN2 538 aaKnown RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 NAPEPLDQ6IQ20 393 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CLEC20AQ6ZU45 233 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CPSF7Q8N684 471 aaKnown RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 ZNF781Q8N8C0 355 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 PYDC1Q8WXC3 89 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 GPR22Q99680 433 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CEP41Q9BYV8 373 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 DRC3Q9H069 523 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 ABHD16BQ9H3Z7 469 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 LAMA3Q16787 3333 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 MATN2O00339 956 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 HDAC3O15379 428 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CABYRO75952 493 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 C2P06681 752 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 AKAP5P24588 427 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 YY1P25490 414 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 EPHB1P54762 984 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CDH17Q12864 832 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 IRF5Q13568 498 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 LAMB3Q13751 1172 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 GRM2Q14416 872 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 HERC3Q15034 1050 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 UGP2Q16851 508 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 CCDC117Q8IWD4 279 aaPredicted RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 PLD6Q8N2A8 252 aaKnown RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 RP9Q8TA86 221 aaKnown RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 VPS39Q96JC1 886 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 PPP1R2P1Q96PQ5 205 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 OSMRQ99650 979 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 FAM49AQ9H0Q0 323 aaPredicted RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 WDR6Q9NNW5 1121 aaKnown RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 STK39Q9UEW8 545 aa8.46□□□□□ -1.05
CHD7-202ENST00000524602 PIN4Q9Y237 131 aaKnown RBP8.46□□□□□ -1.05
CHD7-202ENST00000524602 GOLGA8QA0A0J9YX86 632 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 RGSL1A5PLK6 1076 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 GOLGA8OA6NCC3 632 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 GOLGA8NF8WBI6 632 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 KCNK1O00180 336 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 ADCY6O43306 1168 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 UBTFL6P0CB48 400 aaPredicted RBP8.46□□□□□ -1.06
CHD7-202ENST00000524602 RPL14P50914 215 aaKnown RBP8.46□□□□□ -1.06
CHD7-202ENST00000524602 RAB27AP51159 221 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 TKTL1P51854 596 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 POLE2P56282 527 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 PITX1P78337 314 aaPredicted RBP8.46□□□□□ -1.06
CHD7-202ENST00000524602 COG7P83436 770 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 PRKAA1Q13131 559 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 VWA5B1Q5TIE3 1220 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 SYPL2Q5VXT5 272 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 SEL1L3Q68CR1 1132 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 ZFP1Q6P2D0 407 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 CES3Q6UWW8 571 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 NAPRTQ6XQN6 538 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 PAQR9Q6ZVX9 377 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 OSTM1Q86WC4 334 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 PHTF2Q8N3S3 785 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 GDPD5Q8WTR4 605 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 EPAS1Q99814 870 aa8.46□□□□□ -1.06
CHD7-202ENST00000524602 KIFC1Q9BW19 673 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms