RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 GSTO2Q9H4Y5 243 aa6.46□□□□□ -1.38
PABPC1-216ENST00000520868 CHST12Q9NRB3 414 aa6.46□□□□□ -1.38
PABPC1-216ENST00000520868 TBC1D13Q9NVG8 400 aa6.46□□□□□ -1.38
PABPC1-216ENST00000520868 TBCCD1Q9NVR7 557 aa6.46□□□□□ -1.38
PABPC1-216ENST00000520868 SUCLA2Q9P2R7 463 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-216ENST00000520868 DNAJB4Q9UDY4 337 aa6.46□□□□□ -1.38
PABPC1-216ENST00000520868 PIN4Q9Y237 131 aaKnown RBP6.46□□□□□ -1.38
PABPC1-216ENST00000520868 MTO1Q9Y2Z2 717 aaKnown RBP6.46□□□□□ -1.38
PABPC1-216ENST00000520868 EPN1Q9Y6I3 576 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-216ENST00000520868 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 TCRBV7S2A1N4TA0A589 114 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 ESYT2A0FGR8 921 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 ERN1O75460 977 aaKnown RBP6.45□□□□□ -1.38
PABPC1-216ENST00000520868 OFD1O75665 1012 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 HAUS5O94927 633 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 NUDT3O95989 172 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 ALDH2P05091 517 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 SFPQP23246 707 aaKnown RBP eCLIP6.45□□□□□ -1.38
PABPC1-216ENST00000520868 SFNP31947 248 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 JAK3P52333 1124 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 POLGP54098 1239 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-216ENST00000520868 AMPD3Q01432 767 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 MPP3Q13368 585 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 TDGQ13569 410 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 GIT2Q14161 759 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 KRT32Q14532 448 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 PTPN14Q15678 1187 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 XKR3Q5GH77 459 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 LRCH2Q5VUJ6 765 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 CCDC149Q6ZUS6 474 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 CATSPER4Q7RTX7 472 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 GPR149Q86SP6 731 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 ADSSL1Q8N142 457 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 BICD2Q8TD16 824 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 RIT2Q99578 217 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 VN1R3Q9BXE9 311 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 SLC26A6Q9BXS9 759 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 INO80BQ9C086 356 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-216ENST00000520868 VPS54Q9P1Q0 977 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-216ENST00000520868 ZNHIT2Q9UHR6 403 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 FAM186AA6NE01 2351 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 KMT2EQ8IZD2 1858 aa6.45□□□□□ -1.38
PABPC1-216ENST00000520868 IGKV6-21A0A0C4DH24 114 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 CDHR4A6H8M9 788 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 ZAR1LA6NP61 321 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 GABRDO14764 452 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 KATNA1O75449 491 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 PSMD10O75832 226 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 DDHD2O94830 711 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 PRSS23O95084 383 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 STBD1O95210 358 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 TDP2O95551 362 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 ESRRBO95718 433 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 HMGB1P09429 215 aaKnown RBP6.44□□□□□ -1.38
PABPC1-216ENST00000520868 CNPP09543 421 aaKnown RBP6.44□□□□□ -1.38
PABPC1-216ENST00000520868 AOC1P19801 751 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 CLCN4P51793 760 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 RCAN1P53805 252 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 NLRP5P59047 1200 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 RAB39AQ14964 217 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 Q4G0T1 1027 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 PABPC1LQ4VXU2 614 aaKnown RBP6.44□□□□□ -1.38
PABPC1-216ENST00000520868 OLFML1Q6UWY5 402 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 ZNF410Q86VK4 478 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 COLGALT2Q8IYK4 626 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 CCDC148Q8NFR7 591 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 TBC1D15Q8TC07 691 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 URGCPQ8TCY9 931 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 KCNG4Q8TDN1 519 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 TBCKQ8TEA7 893 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 MARS2Q96GW9 593 aaKnown RBP6.44□□□□□ -1.38
PABPC1-216ENST00000520868 TEKT5Q96M29 485 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 NLRP4Q96MN2 994 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 JAKMIP1Q96N16 626 aaKnown RBP6.44□□□□□ -1.38
PABPC1-216ENST00000520868 SFXN1Q9H9B4 322 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 MRPL17Q9NRX2 175 aaKnown RBP6.44□□□□□ -1.38
PABPC1-216ENST00000520868 USP25Q9UHP3 1055 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 PCDHB2Q9Y5E7 798 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 PCDHA13Q9Y5I0 950 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 VPS13AQ96RL7 3174 aa6.44□□□□□ -1.38
PABPC1-216ENST00000520868 CCDC195A0A1B0GUA6 201 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 HTRA2O43464 458 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-216ENST00000520868 PCDHGA12O60330 932 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 N4BP1O75113 896 aaKnown RBP6.43□□□□□ -1.38
PABPC1-216ENST00000520868 OR1G1P47890 313 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 RAB27AP51159 221 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 AK2P54819 239 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 SCAPQ12770 1279 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 TARDBPQ13148 414 aaKnown RBP eCLIP6.43□□□□□ -1.38
PABPC1-216ENST00000520868 ANGPT1Q15389 498 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 LETM2Q2VYF4 491 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 PLA2G4FQ68DD2 849 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 BLOC1S2Q6QNY1 142 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 ANO5Q75V66 913 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 MRPL10Q7Z7H8 261 aaKnown RBP6.43□□□□□ -1.38
PABPC1-216ENST00000520868 CCDC105Q8IYK2 499 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 RDM1Q8NG50 284 aa6.43□□□□□ -1.38
PABPC1-216ENST00000520868 IFI44Q8TCB0 444 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms