RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MEIS2O14770 477 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 ACOX3O15254 700 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 ASNA1O43681 348 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 DYRK3O43781 588 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 TADA2AO75478 443 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 CDH1P12830 882 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 SERPINB1P30740 379 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 SERPINB9P50453 376 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 GNG2P59768 71 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 ECT2LQ008S8 904 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 GPR162Q16538 588 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 CDONQ4KMG0 1287 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
PABPC1-208ENST00000519004 UNC5AQ6ZN44 842 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 KIAA0408Q6ZU52 694 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 BBS12Q6ZW61 710 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 CLEC10AQ8IUN9 316 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 ARMC8Q8IUR7 673 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 OFCC1Q8IZS5 231 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 LSMEM1Q8N8F7 131 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 FBXL13Q8NEE6 735 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 ANGPTL6Q8NI99 470 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 LPGAT1Q92604 370 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 EFCAB1Q9HAE3 211 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 MTMR4Q9NYA4 1195 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 ADA2Q9NZK5 511 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 COPG2Q9UBF2 871 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
PABPC1-208ENST00000519004 TAF4O00268 1085 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 PAPSS1O43252 624 aaPredicted RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ALDOAP04075 364 aaKnown RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 MBL2P11226 248 aaPredicted RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 PSMD8P48556 350 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 EIF6P56537 245 aaKnown RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 GCNT1Q02742 428 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 VPS72Q15906 364 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 CRY1Q16526 586 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 INTS11Q5TA45 600 aaKnown RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 CYP2W1Q8TAV3 490 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 S100ZQ8WXG8 99 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 PGBD4Q96DM1 585 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 NGLY1Q96IV0 654 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 MARK4Q96L34 752 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ZBED2Q9BTP6 218 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 TMEM206Q9H813 350 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ARMC1Q9NVT9 282 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 WRAP73Q9P2S5 460 aaPredicted RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 AGTPBP1Q9UPW5 1226 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 TESMINQ9Y4I5 508 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 SHANK3Q9BYB0 1731 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ARHGEF35A5YM69 484 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 TCAF2A6NFQ2 919 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 CCRL2O00421 344 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 SLC22A2O15244 555 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 CHADO15335 359 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 IDH3BO43837 385 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 KRT3P12035 628 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 HIBADHP31937 336 aaKnown RBP13.79□□□□□ -0.2
PABPC1-208ENST00000519004 AP3B2Q13367 1082 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 TUBA3CQ13748 450 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 XAF1Q6GPH4 301 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ZNF773Q6PK81 442 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ERMP1Q7Z2K6 904 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ZNF280CQ8ND82 737 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 VMP1Q96GC9 406 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 DHRS9Q9BPW9 319 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 EFHD1Q9BUP0 239 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 OR2B2Q9GZK3 357 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 LHPPQ9H008 270 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 GLT8D2Q9H1C3 349 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 CPNE5Q9HCH3 593 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 PCDHGA7Q9Y5G6 932 aa13.79□□□□□ -0.2
PABPC1-208ENST00000519004 TAF1P21675 1872 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 RNF103O00237 685 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 NEMP1O14524 444 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 TPP1O14773 563 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 NRP1O14786 923 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 NTSR2O95665 410 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CYP3A4P08684 503 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CASP3P42574 277 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 STX1BP61266 288 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 TRIM32Q13049 653 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 MAPK11Q15759 364 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CYP2R1Q6VVX0 501 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CAND1Q86VP6 1230 aaKnown RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CAMK1DQ8IU85 385 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 PNPT1Q8TCS8 783 aaKnown RBP13.78□□□□□ -0.2
PABPC1-208ENST00000519004 ACMSDQ8TDX5 336 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 CYGBQ8WWM9 190 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 PIGBQ92521 554 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 FKBP10Q96AY3 582 aa13.78□□□□□ -0.2
PABPC1-208ENST00000519004 FAF2Q96CS3 445 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms