RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 CBX4O00257 560 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 FGF10O15520 208 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 FOXD2O60548 495 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 SNAP91O60641 907 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 RAMP2O60895 175 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 MPLP40238 635 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 DPP6P42658 865 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ZNF135P52742 658 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 RPS14P62263 151 aaKnown RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 SEMA3BQ13214 749 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ELAVL3Q14576 367 aaKnown RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 DLG2Q15700 870 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 DSG4Q86SJ6 1040 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 RTL3Q8N8U3 475 aaKnown RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ATP11CQ8NB49 1132 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ZNF564Q8TBZ8 553 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 SEMA4GQ9NTN9 838 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 GPATCH2LQ9NWQ4 482 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-210ENST00000515198 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 NCKAP1Q9Y2A7 1128 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 NUP205Q92621 2012 aa12.78□□□□□ -0.36
PTCD2-210ENST00000515198 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.36
PTCD2-210ENST00000515198 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 CXorf51AA0A1B0GTR3 108 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 WASH4PA8MWX3 477 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 EEF2KO00418 725 aaKnown RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 ALOX15BO15296 676 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 DAPK3O43293 454 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 IGLV3-19P01714 112 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 TMEM253P0C7T8 217 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 C7P10643 843 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 SRCP12931 536 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 CST6Q15828 149 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 CSRP2Q16527 193 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 BOLA3Q53S33 107 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 ARMCX6Q7L4S7 300 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 FAM124AQ86V42 546 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 STK40Q8N2I9 435 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 GANCQ8TET4 914 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 FRS2Q8WU20 508 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 OR8D1Q8WZ84 308 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 TOE1Q96GM8 510 aaKnown RBP12.77□□□□□ -0.37
PTCD2-210ENST00000515198 PACSIN1Q9BY11 444 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 CHD5Q8TDI0 1954 aa12.77□□□□□ -0.37
PTCD2-210ENST00000515198 BNIP3LO60238 219 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 ZMPSTE24O75844 475 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 ADH1BP00325 375 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 MT-CO1P00395 513 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 IL1BP01584 269 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 VAV1P15498 845 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 GLDCP23378 1020 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 SLC8A1P32418 973 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 ARL4AP40617 200 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 PTGER3P43115 390 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 SSR1P43307 286 aaKnown RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 PSMD8P48556 350 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 YBEYP58557 167 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 LMNB2Q03252 620 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 CA9Q16790 459 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 HADHQ16836 314 aaKnown RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 DAB2IPQ5VWQ8 1189 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 RFX8Q6ZV50 586 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 Q6ZVU0 165 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 USP30Q70CQ3 517 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 ZNF354CQ86Y25 554 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 MMAAQ8IVH4 418 aaKnown RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
PTCD2-210ENST00000515198 OMDQ99983 421 aa12.76□□□□□ -0.37
PTCD2-210ENST00000515198 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms