RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TEKT4Q8WW24 435 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 HMGB4Q8WW32 186 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ALG14Q96F25 216 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MYO19Q96H55 970 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MRGPRX1Q96LB2 322 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC114Q96M63 670 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 NUP85Q9BW27 656 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MUC3BQ9H195 1237 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MAGEH1Q9H213 219 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 NHEJ1Q9H9Q4 299 aaPredicted RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 FAM86C1Q9NVL1 165 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 MYO1AQ9UBC5 1043 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF212Q9UDV6 495 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 ANAPC7Q9UJX3 599 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 VPS28Q9UK41 221 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 GMEB2Q9UKD1 530 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 INTS6Q9UL03 887 aaKnown RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 TPX2Q9ULW0 747 aaKnown RBP8.4□□□□□ -1.06
NEDD4-210ENST00000513957 USP18Q9UMW8 372 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 AP4E1Q9UPM8 1137 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 NEU3Q9UQ49 428 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 PCDHGA5Q9Y5G8 931 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 OR51B4Q9Y5P0 310 aa8.4□□□□□ -1.06
NEDD4-210ENST00000513957 AP5Z1O43299 807 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 HRO43593 1189 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 GFRA3O60609 400 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 PRMT3O60678 531 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RNASEH1O60930 286 aaKnown RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 SRGAP2O75044 1071 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 MTA2O94776 668 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 IPO7O95373 1038 aaKnown RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 LCA5LO95447 670 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RETP07949 1114 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 PRKCHP24723 683 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 EPHB2P29323 1055 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 OXTRP30559 389 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 HOXD12P35452 270 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ARHGAP25P42331 645 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 HCAR3P49019 387 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 MRE11P49959 708 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 COPAP53621 1224 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 TPI1P60174 286 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 OGDHQ02218 1023 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 GNA12Q03113 381 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 DMWDQ09019 674 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF252P-AS1Q0IIN9 211 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 DPYSL2Q16555 572 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 HADHQ16836 314 aaKnown RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 PARP15Q460N3 678 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 TTC31Q49AM3 519 aaPredicted RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ARTNQ5T4W7 220 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RETSATQ6NUM9 610 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 SCYL2Q6P3W7 929 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 LYPD8Q6UX82 237 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 CEP68Q76N32 757 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 DSG4Q86SJ6 1040 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 KBTBD6Q86V97 674 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 CIR1Q86X95 450 aaPredicted RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 TMTC1Q8IUR5 882 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 TXLNBQ8N3L3 684 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RTL3Q8N8U3 475 aaKnown RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF564Q8TBZ8 553 aaPredicted RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 CYB5D2Q8WUJ1 264 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 CASKIN2Q8WXE0 1202 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RFFLQ8WZ73 363 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RUBCNQ92622 972 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 PRCCQ92733 491 aaPredicted RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 SIPA1Q96FS4 1042 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 MRGPRX3Q96LB0 322 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ACOX2Q99424 681 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 PCED1AQ9H1Q7 454 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ZWILCHQ9H900 591 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 PRDM16Q9HAZ2 1276 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 MPP6Q9NZW5 540 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
NEDD4-210ENST00000513957 HPCAL4Q9UM19 191 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 ERVW-1Q9UQF0 538 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
NEDD4-210ENST00000513957 OTOGLQ3ZCN5 2332 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 PIEZO1Q92508 2521 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 FAM186AA6NE01 2351 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 TLDC2A0PJX2 215 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 FAM170AA1A519 330 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 RAMP2O60895 175 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 CNTN5O94779 1100 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ADH1BP00325 375 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 KRT7P08729 469 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ACADMP11310 421 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 MIPP30301 263 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 GGCXP38435 758 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 IRAK1P51617 712 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 NDST2P52849 883 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 HADHBP55084 474 aaKnown RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 SPA17Q15506 151 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 OCLNQ16625 522 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 PMS2CLQ68D20 193 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF776Q68DI1 518 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms