RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 CLDN11O75508 207 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 JUPP14923 745 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 EPHA8P29322 1005 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 CLCN1P35523 988 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 RXRGP48443 463 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 CLDN6P56747 220 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 SNX16P57768 344 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 MTA1Q13330 715 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 STAT4Q14765 748 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 Q6ZVU0 165 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC47A2Q86VL8 602 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 PIP4K2CQ8TBX8 421 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 ERVMER34-1Q9H9K5 563 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 AJAP1Q9UKB5 411 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 TBC1D30Q9Y2I9 924 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 NYNRINQ9P2P1 1898 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 LOC400499M0QZD8 3231 aa13.75□□□□□ -0.21
POLR2J3-217ENST00000513438 FASNP49327 2511 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 IGSF10Q6WRI0 2623 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 ALOX15BO15296 676 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 MAGEC1O60732 1142 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 DAB1O75553 588 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 RFPL3O75679 317 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 CNTN5O94779 1100 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 ADCY5O95622 1261 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 MT-CO1P00395 513 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 C1SP09871 688 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 PNMA6AP0CW24 399 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 SRCP12931 536 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 CDH4P55283 916 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 RNASE9P60153 205 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 PTPN20Q4JDL3 420 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 AGBL4Q5VU57 503 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC26A9Q7LBE3 791 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 OXR1Q8N573 874 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 ZNF397Q8NF99 534 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 SYNCQ9H7C4 482 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 ANLNQ9NQW6 1124 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 GCN1Q92616 2671 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 ARID1BQ8NFD5 2236 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 COL5A1P20908 1838 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-217ENST00000513438 E9PAM4 449 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 SNAP91O60641 907 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 CDK4P11802 303 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 NUDT1P36639 197 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 CXCR3P49682 368 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 ACADVLP49748 655 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 TAS2R38P59533 333 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 KRT83P78385 493 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 TPD52L1Q16890 204 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 ALFQ53S48 1182 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 OTUD1Q5VV17 481 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 SMYD5Q6GMV2 418 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 KANSL1Q7Z3B3 1105 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 TRIM69Q86WT6 500 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 ATP11CQ8NB49 1132 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 TSC1Q92574 1164 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 PSMB7Q99436 277 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 NPY6RQ99463 290 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 PIGVQ9NUD9 493 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 RRN3Q9NYV6 651 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 SNX10Q9Y5X0 201 aa13.73□□□□□ -0.21
POLR2J3-217ENST00000513438 DRGXA6NNA5 263 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 PRAMEF26H0Y7S4 382 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 K7ERQ8 282 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 SLC31A1O15431 190 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 RNGTTO60942 597 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 CTSLP07711 333 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 RHOCP08134 193 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 CHRNA3P32297 505 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 HNF1BP35680 557 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 SULT1E1P49888 294 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 BPIFB4P59827 614 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 DEUP1Q05D60 604 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 OVGP1Q12889 678 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 SETMARQ53H47 684 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 BRMS1LQ5PSV4 323 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
POLR2J3-217ENST00000513438 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms