RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.53□□□□□ -0.56
RNF4-218ENST00000513284 SALL4Q9UJQ4 1053 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 NBASA2RRP1 2371 aa11.53□□□□□ -0.56
RNF4-218ENST00000513284 CCDC187A0A096LP49 1063 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 POM121BA6NF01 834 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 TCEA3O75764 348 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 CSF2P04141 144 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 SFTPCP11686 197 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 INHBCP55103 352 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 TBX4P57082 545 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 CUL4BQ13620 913 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 SKIDA1Q1XH10 827 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 TPRG1LQ5T0D9 272 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 ATL3Q6DD88 541 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 B3GNT8Q7Z7M8 397 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 C14orf80Q86SX3 495 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 KIAA0895Q8NCT3 520 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 ZNF548Q8NEK5 533 aaPredicted RBP11.52□□□□□ -0.57
RNF4-218ENST00000513284 TPCN2Q8NHX9 752 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 KCTD13Q8WZ19 329 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 SLC39A13Q96H72 371 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 DNAI2Q9GZS0 605 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 EPN3Q9H201 632 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 PREBQ9HCU5 417 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 SEPT3Q9UH03 358 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 TSPAN16Q9UKR8 245 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 ACSL6Q9UKU0 697 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 PCDHGA7Q9Y5G6 932 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 CSNK1G3Q9Y6M4 447 aa11.52□□□□□ -0.57
RNF4-218ENST00000513284 ITPR2Q14571 2701 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 PVALEFA0A1B0GWK0 134 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 NTN3O00634 580 aaPredicted RBP11.51□□□□□ -0.57
RNF4-218ENST00000513284 MCF2LO15068 1137 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 SPINT1O43278 529 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 ATP9BO43861 1147 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 KLRC4O43908 158 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 NR3C1P04150 777 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 CTSLP07711 333 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 TRIM49P0CI25 452 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 TRIM49CP0CI26 452 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 HGFP14210 728 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 UGT1A5P35504 534 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
RNF4-218ENST00000513284 VAMP7P51809 220 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 PLK1P53350 603 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 MCCD1P59942 119 aaPredicted RBP11.51□□□□□ -0.57
RNF4-218ENST00000513284 HNRNPKP61978 463 aaKnown RBP eCLIP11.51□□□□□ -0.57
RNF4-218ENST00000513284 CDH18Q13634 790 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 FGL2Q14314 439 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 GOLGA7BQ2TAP0 167 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 DEFB133Q30KQ1 61 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 NUGGCQ68CJ6 796 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 SEL1L3Q68CR1 1132 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 HORMAD1Q86X24 394 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 SCML4Q8N228 414 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 OR52K2Q8NGK3 314 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 CLEC4CQ8WTT0 213 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 IPO9Q96P70 1041 aaKnown RBP11.51□□□□□ -0.57
RNF4-218ENST00000513284 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 KCNK4Q9NYG8 393 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 PNMA8BQ9ULN7 279 aaPredicted RBP11.51□□□□□ -0.57
RNF4-218ENST00000513284 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 HS3ST3A1Q9Y663 406 aa11.51□□□□□ -0.57
RNF4-218ENST00000513284 SPTY2D1-AS1A0A0U1RR47 76 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 BLACEA4D250 179 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 PIK3R2O00459 728 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 PLD2O14939 933 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 MUSKO15146 869 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 RAD51BO15315 384 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 POLR2DO15514 142 aaKnown RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 PPFIA2O75334 1257 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 GCATO75600 419 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 MOCS3O95396 460 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 LCP1P13796 627 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 NME1P15531 152 aaKnown RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 HNRNPA2B1P22626 353 aaKnown RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 ME1P48163 572 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 DLG2Q15700 870 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 TMEM259Q4ZIN3 620 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 FAM46CQ5VWP2 391 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 RNF219Q5W0B1 726 aaPredicted RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 CEP135Q66GS9 1140 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 PMF1Q6P1K2 205 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 SHC4Q6S5L8 630 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 VASH2Q86V25 355 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 HSCBQ8IWL3 235 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 SLC35F3Q8IY50 421 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 FBXO39Q8N4B4 442 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 SLC35F5Q8WV83 523 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
RNF4-218ENST00000513284 CCDC47Q96A33 483 aaKnown RBP11.5□□□□□ -0.57
RNF4-218ENST00000513284 LIN37Q96GY3 246 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms