RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 NME3Q13232 169 aa6□□□□□ -1.45
RNF4-217ENST00000511892 AUHQ13825 339 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 NR1I3Q14994 352 aa6□□□□□ -1.45
RNF4-217ENST00000511892 HNRNPA1L2Q32P51 320 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 PLEKHG6Q3KR16 790 aa6□□□□□ -1.45
RNF4-217ENST00000511892 WDR45BQ5MNZ6 344 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SYCP2LQ5T4T6 812 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SPECC1LQ69YQ0 1117 aa6□□□□□ -1.45
RNF4-217ENST00000511892 APTXQ7Z2E3 356 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 BNIPLQ7Z465 357 aa6□□□□□ -1.45
RNF4-217ENST00000511892 RABEPKQ7Z6M1 372 aa6□□□□□ -1.45
RNF4-217ENST00000511892 ZDHHC17Q8IUH5 632 aa6□□□□□ -1.45
RNF4-217ENST00000511892 CCAR2Q8N163 923 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 ZCCHC9Q8N567 271 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 MINDY1Q8N5J2 469 aa6□□□□□ -1.45
RNF4-217ENST00000511892 KDM1BQ8NB78 822 aa6□□□□□ -1.45
RNF4-217ENST00000511892 DEFB124Q8NES8 71 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SLC20A1Q8WUM9 679 aa6□□□□□ -1.45
RNF4-217ENST00000511892 CPA5Q8WXQ8 436 aa6□□□□□ -1.45
RNF4-217ENST00000511892 PTPRN2Q92932 1015 aa6□□□□□ -1.45
RNF4-217ENST00000511892 RNF34Q969K3 372 aa6□□□□□ -1.45
RNF4-217ENST00000511892 C18orf8Q96DM3 657 aa6□□□□□ -1.45
RNF4-217ENST00000511892 RPL10LQ96L21 214 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 NOX5Q96PH1 765 aa6□□□□□ -1.45
RNF4-217ENST00000511892 FAM129BQ96TA1 746 aa6□□□□□ -1.45
RNF4-217ENST00000511892 ORAI3Q9BRQ5 295 aa6□□□□□ -1.45
RNF4-217ENST00000511892 GTPBP2Q9BX10 602 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 KCNF1Q9H3M0 494 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SYNCQ9H7C4 482 aa6□□□□□ -1.45
RNF4-217ENST00000511892 FBRSQ9HAH7 460 aa6□□□□□ -1.45
RNF4-217ENST00000511892 TMPRSS4Q9NRS4 437 aa6□□□□□ -1.45
RNF4-217ENST00000511892 DNAAF2Q9NVR5 837 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6□□□□□ -1.45
RNF4-217ENST00000511892 SERGEFQ9UGK8 458 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SLC12A6Q9UHW9 1150 aa6□□□□□ -1.45
RNF4-217ENST00000511892 EIF2B4Q9UI10 523 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 TMEM59LQ9UK28 342 aa6□□□□□ -1.45
RNF4-217ENST00000511892 NOCTQ9UK39 431 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 VANGL2Q9ULK5 521 aa6□□□□□ -1.45
RNF4-217ENST00000511892 WASF3Q9UPY6 502 aa6□□□□□ -1.45
RNF4-217ENST00000511892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6□□□□□ -1.45
RNF4-217ENST00000511892 OR51B4Q9Y5P0 310 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SNX10Q9Y5X0 201 aa6□□□□□ -1.45
RNF4-217ENST00000511892 SMG1Q96Q15 3661 aaKnown RBP6□□□□□ -1.45
RNF4-217ENST00000511892 KNTC1P50748 2209 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 PKD1L2Q7Z442 2459 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 EDDM13A0A1B0GTR0 161 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 A0A1B0GTW7 788 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 A0A1B0GVM2 712 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 TARSL2A2RTX5 802 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 GOLGA6L9A6NEM1 432 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 TCAF2A6NFQ2 919 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 DRGXA6NNA5 263 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 MID1O15344 667 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 BCAT2O15382 392 aaPredicted RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 OPHN1O60890 802 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 MOCS3O95396 460 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SEMA4FO95754 770 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 LSM8O95777 96 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 TOP3BO95985 862 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 DNTTP04053 509 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 CYP1A1P04798 512 aaPredicted RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 IGHV4-34P06331 123 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SRPRAP08240 638 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 SYPP08247 313 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SKILP12757 684 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 CEACAM1P13688 526 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 GNSP15586 552 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SOX5P35711 763 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 FLT3P36888 993 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SCNN1AP37088 669 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 PBX1P40424 430 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 GCGRP47871 477 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SULT1E1P49888 294 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 METAP1P53582 386 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 COPB1P53618 953 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 SNX16P57768 344 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 POLR2FP61218 127 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 ST8SIA6P61647 398 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 NOMO3P69849 1222 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 FAM193AP78312 1265 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SHC2P98077 582 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 ZBTB16Q05516 673 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 ZNF252P-AS1Q0IIN9 211 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 GRIK2Q13002 908 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 TBX2Q13207 712 aaPredicted RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 SLC12A1Q13621 1099 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SYCP1Q15431 976 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 SLC25A52Q3SY17 297 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 RAB6CQ53S08 254 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 ALFQ53S48 1182 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 BRMS1LQ5PSV4 323 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 RABGAP1LQ5R372 815 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 TTC39BQ5VTQ0 682 aaPredicted RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 NAA35Q5VZE5 725 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 ZNF776Q68DI1 518 aaPredicted RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 BRICD5Q6PL45 260 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 ERICH1Q86X53 443 aa5.99□□□□□ -1.45
RNF4-217ENST00000511892 MMAAQ8IVH4 418 aaKnown RBP5.99□□□□□ -1.45
RNF4-217ENST00000511892 CCDC117Q8IWD4 279 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms