RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 VRK3Q8IV63 474 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 SUMF1Q8NBK3 374 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 ZBTB10Q96DT7 871 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 NECTIN4Q96NY8 510 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 SMOQ99835 787 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 RTP3Q9BQQ7 232 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 FTHL17Q9BXU8 183 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 JMJD4Q9H9V9 463 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 ERVK-5Q9HDB9 667 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 PIH1D1Q9NWS0 290 aaKnown RBP5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 RALYQ9UKM9 306 aaKnown RBP5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 PADI3Q9ULW8 664 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 LZTS1Q9Y250 596 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 SQORQ9Y6N5 450 aa5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 CNOT1A5YKK6 2376 aaKnown RBP5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 FASNP49327 2511 aaKnown RBP5.73□□□□□ -1.49
CALCOCO2-212ENST00000509014 COL4A3Q01955 1670 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 A0A1W2PPL8 197 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 PIPSLA2A3N6 862 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 GRID2IPA4D2P6 1211 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 MYO1FO00160 1098 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 FRS3O43559 492 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 AKAP8O43823 692 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 MGEA5O60502 916 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 FGAP02671 866 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 SP9P0CG40 484 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 CCND2P30279 289 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 MTHFRP42898 656 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 ATXN1P54253 815 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 MXRA7P84157 204 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 ITIH3Q06033 890 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 DYRK1AQ13627 763 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 SPOUT1Q5T280 376 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 SP5Q6BEB4 398 aaPredicted RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 CES5AQ6NT32 575 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 CCDC149Q6ZUS6 474 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 THNSL1Q8IYQ7 743 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 ADGRG5Q8IZF4 528 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 C12orf76Q8N812 135 aaPredicted RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 TDRD5Q8NAT2 981 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 PSD4Q8NDX1 1056 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 FAM46DQ8NEK8 389 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 KBTBD7Q8WVZ9 684 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 MRPS27Q92552 414 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 RUBCNQ92622 972 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 CASP10Q92851 521 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 TMEM125Q96AQ2 219 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 INPP4AQ96PE3 977 aaPredicted RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 DPH1Q9BZG8 443 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 VAT1LQ9HCJ6 419 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 MAP3K20Q9NYL2 800 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 TUBE1Q9UJT0 475 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 ZNF215Q9UL58 517 aaPredicted RBP5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 NEU2Q9Y3R4 380 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 PKD1L2Q7Z442 2459 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 FRMPD4Q14CM0 1322 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 IGSF9BQ9UPX0 1349 aa5.72□□□□□ -1.49
CALCOCO2-212ENST00000509014 GSTTP1A0A1W2PQM5 241 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 CFAP69A5D8W1 941 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 E7ENX8 843 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TOR1BO14657 336 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TBX3O15119 743 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 SUV39H1O43463 412 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 VPS4BO75351 444 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 CHRM3P20309 590 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 GATA3P23771 443 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 KCNJ5P48544 419 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 HAND2P61296 217 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 SP4Q02446 784 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TAP2Q03519 686 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 PPFIA1Q13136 1202 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TDGQ13569 410 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 NEDD9Q14511 834 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 PTPAQ15257 358 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TMEM266Q2M3C6 531 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 SLC35G1Q2M3R5 365 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 CD300EQ496F6 205 aaPredicted RBP5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 RARS2Q5T160 578 aaKnown RBP5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 RNF220Q5VTB9 566 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 FAM160B1Q5W0V3 765 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TBC1D10CQ8IV04 446 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 ULK2Q8IYT8 1036 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 SAMD3Q8N6K7 520 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 MRPL43Q8N983 215 aaKnown RBP5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 NEU4Q8WWR8 484 aaPredicted RBP5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 MAML1Q92585 1016 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 SIK2Q9H0K1 926 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 ENTPD7Q9NQZ7 604 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 RGS18Q9NS28 235 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 SYBUQ9NX95 663 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 DLGAP2Q9P1A6 1054 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 HESX1Q9UBX0 185 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 ING1Q9UK53 422 aaPredicted RBP5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 DDX19BQ9UMR2 479 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 DUSP12Q9UNI6 340 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 PCDHB7Q9Y5E2 793 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 TRPV2Q9Y5S1 764 aa5.71□□□□□ -1.5
CALCOCO2-212ENST00000509014 NEDD4P46934 1319 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms