RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 MEA1Q16626 185 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 EXOC3L4Q17RC7 722 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 HNRNPA1L2Q32P51 320 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 CIR1Q86X95 450 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 MMAAQ8IVH4 418 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 TTC17Q96AE7 1141 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 DDIT4Q9NX09 232 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 SERGEFQ9UGK8 458 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 FZD4Q9ULV1 537 aa16.5■□□□□ 0.23
PDLIM7-213ENST00000505074 TTC34A8MYJ7 566 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 MID1O15344 667 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 GRAP2O75791 330 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 SRPRAP08240 638 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 PDGFRAP16234 1089 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 NNMTP40261 264 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 LSSP48449 732 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 PSMD8P48556 350 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 UBE2HP62256 183 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 ECT2LQ008S8 904 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 TAF5Q15542 800 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 CST6Q15828 149 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 HS1BP3Q53T59 392 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 RABGAP1LQ5R372 815 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 OR6B2Q6IFH4 312 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 BEND5Q7L4P6 421 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 TMEM110Q86TL2 294 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 MFSD2AQ8NA29 543 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 MYO19Q96H55 970 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 PPP1R13BQ96KQ4 1090 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 LMLNQ96KR4 655 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 RPL10LQ96L21 214 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 NOX5Q96PH1 765 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 DEPDC7Q96QD5 511 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 FAM117AQ9C073 453 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 POLR1BQ9H9Y6 1135 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 THSD1Q9NS62 852 aa16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDLIM7-213ENST00000505074 EDDM13A0A1B0GTR0 161 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 BECN2A8MW95 431 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 KCNU1A8MYU2 1149 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 PES1O00541 588 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 SIGLEC6O43699 453 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 MAGEC1O60732 1142 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 USP12O75317 370 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 NTRK1P04629 796 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 CCR1P32246 355 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 KRT9P35527 623 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 STK19P49842 368 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 ZNF211Q13398 564 aaPredicted RBP16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 APCDD1Q8J025 514 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 DEFB106AQ8N104 65 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 C1orf131Q8NDD1 294 aaKnown RBP16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 MRGPRX3Q96LB0 322 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 CPXM1Q96SM3 734 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
PDLIM7-213ENST00000505074 PTPN13Q12923 2485 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 TDRD6O60522 2096 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 TARSL2A2RTX5 802 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 K7ENP7 123 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 HSF2BPO75031 334 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC2A3P11169 496 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 KRT10P13645 584 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC8A1P32418 973 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 PTK2Q05397 1052 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 NME3Q13232 169 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 EFHC1Q5JVL4 640 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 C9orf64Q5T6V5 341 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 TTC39BQ5VTQ0 682 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 CDCP2Q5VXM1 449 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 KIAA1614Q5VZ46 1190 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 NAPEPLDQ6IQ20 393 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 INO80CQ6PI98 192 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 FAM183BPQ6ZVS7 135 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 SND1Q7KZF4 910 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 CCAR2Q8N163 923 aaKnown RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 OR14C36Q8NHC7 312 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 VCPIP1Q96JH7 1222 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 RPRD1AQ96P16 312 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 SLCO3A1Q9UIG8 710 aa16.47■□□□□ 0.23
PDLIM7-213ENST00000505074 A0A1B0GVM2 712 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 TCAF2A6NFQ2 919 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 C10orf142B7Z368 130 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 TRIM38O00635 465 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 OPA1O60313 960 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 SDC3O75056 442 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 IL1BP01584 269 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 IGLV3-25P01717 112 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 PRKCSHP14314 528 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 PON1P27169 355 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 SNX16P57768 344 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 CENPCQ03188 943 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 NFATC3Q12968 1075 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC12A1Q13621 1099 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 PRPF39Q86UA1 669 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 IQCHQ86VS3 1027 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms