RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SIK3Q9Y2K2 1263 aa19.95■□□□□ 0.78
UBE2D3-215ENST00000503418 NEUROG3Q9Y4Z2 214 aa19.95■□□□□ 0.78
UBE2D3-215ENST00000503418 CEP295Q9C0D2 2601 aa19.95■□□□□ 0.78
UBE2D3-215ENST00000503418 KMT2BQ9UMN6 2715 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3DA0A087WVF3 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3IA0A087WXS9 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3EA0A087X179 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3KA0A087X1G2 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3FA6NER0 549 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3LB9A6J9 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 C1QTNF3-AMACRE9PGA6 284 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 FLRT2O43155 660 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 CBFA2T3O75081 653 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 CYP1A1P04798 512 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3HP0C7X1 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 STAT1P42224 750 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 CCT8P50990 548 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 SYCP1Q15431 976 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 CDO1Q16878 200 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 ACBD5Q5T8D3 534 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 FAM46CQ5VWP2 391 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3GQ6DHY5 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3CQ6IPX1 549 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 SETD3Q86TU7 594 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 TBC1D3Q8IZP1 549 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 PNPLA1Q8N8W4 532 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 ATP11CQ8NB49 1132 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 NEK11Q8NG66 645 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 C1orf74Q96LT6 269 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 C11orf70Q9BRQ4 267 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 C2orf49Q9BVC5 232 aaPredicted RBP19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 VPS51Q9UID3 782 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 DAAM1Q9Y4D1 1078 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 PCDHGB2Q9Y5G2 931 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 CABIN1Q9Y6J0 2220 aa19.94■□□□□ 0.78
UBE2D3-215ENST00000503418 A0A0D9SEW6 157 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 DRGXA6NNA5 263 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 H0Y8X5 98 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 RTN2O75298 545 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 MT-CO1P00395 513 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 SRCP12931 536 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 CHRNB2P17787 502 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 CDK11BP21127 795 aaKnown RBP19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 MMP8P22894 467 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 OR1E1P30953 314 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 CTSKP43235 329 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 CCR5P51681 352 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 PPP2CBP62714 309 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 PPP2CAP67775 309 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 IL9RQ01113 521 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 SUZ12Q15022 739 aaKnown RBP19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 C6orf118Q5T5N4 469 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 PIP4K2CQ8TBX8 421 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 RHBDD1Q8TEB9 315 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 GATA6Q92908 595 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 SKA1Q96BD8 255 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 HAPLN3Q96S86 360 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 APOBEC2Q9Y235 224 aaKnown RBP19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 HS3ST2Q9Y278 367 aa19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 FARP1Q9Y4F1 1045 aaPredicted RBP19.93■□□□□ 0.78
UBE2D3-215ENST00000503418 IGLV3-10A0A075B6K4 115 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 LGALS16A8MUM7 142 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 MCF2LO15068 1137 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 VILLO15195 856 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 ALOX15BO15296 676 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 RRM1P23921 792 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 CD38P28907 300 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 UBXN1Q04323 297 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 C15orf59Q2T9L4 293 aaPredicted RBP19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 RAB6CQ53S08 254 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 LINGO4Q6UY18 593 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 TRIM72Q6ZMU5 477 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 ARCQ7LC44 396 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 BNIPLQ7Z465 357 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 RAB44Q7Z6P3 723 aaPredicted RBP19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 DCAF4L2Q8NA75 395 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 OR7D4Q8NG98 312 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 RXFP2Q8WXD0 754 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 SERAC1Q96JX3 654 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 CCDC114Q96M63 670 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 TMEM121BQ9BXQ6 578 aaPredicted RBP19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 RAB6CQ9H0N0 254 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 SEPT11Q9NVA2 429 aaKnown RBP19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 LIMA1Q9UHB6 759 aaKnown RBP19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 PPM1HQ9ULR3 514 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 BTBD3Q9Y2F9 522 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 MSRB2Q9Y3D2 182 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 USP24Q9UPU5 2620 aa19.92■□□□□ 0.78
UBE2D3-215ENST00000503418 K7ERQ8 282 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 WNT9AO14904 365 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 SLC7A4O43246 635 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 GJB6O95452 261 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 WNT1P04628 370 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 MAT2AP31153 395 aaKnown RBP19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 SDC4P31431 198 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 NSFP46459 744 aaKnown RBP19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 CNTN1Q12860 1018 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 CCDC183Q5T5S1 534 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 DBX2Q6ZNG2 339 aa19.91■□□□□ 0.78
UBE2D3-215ENST00000503418 GLRX5Q86SX6 157 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms