RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 IGHV1OR15-9A0A0B4J2B8 117 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 RHOBTB1O94844 696 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 MT-CO1P00395 513 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 IGLV3-19P01714 112 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 RARAP10276 462 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 SRCP12931 536 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 GLDCP23378 1020 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 MAN1A1P33908 653 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 CYLC1P35663 651 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 MAGEA1P43355 309 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 YBEYP58557 167 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 RPS14P62263 151 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 SLC20A2Q08357 652 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 DLG2Q15700 870 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 ELF2Q15723 593 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 SMTNL2Q2TAL5 461 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 KCNT1Q5JUK3 1230 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 PMS2CLQ68D20 193 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 ZNF776Q68DI1 518 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 IL31Q6EBC2 164 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 RETSATQ6NUM9 610 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 SLC36A4Q6YBV0 504 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 RFX8Q6ZV50 586 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 UMODL1-AS1Q8N2C9 162 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 FRMD1Q8N878 549 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 NOL6Q9H6R4 1146 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 ZWILCHQ9H900 591 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 GMEB2Q9UKD1 530 aa18.65■□□□□ 0.58
PDLIM7-209ENST00000503346 CKAP5Q14008 2032 aa18.64■□□□□ 0.58
PDLIM7-209ENST00000503346 CBX4O00257 560 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 RETP07949 1114 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 GOT1P17174 413 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 ARHGAP25P42331 645 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 ARF5P84085 180 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 ELAVL3Q14576 367 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 POLD3Q15054 466 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 HADHQ16836 314 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 PPP6R3Q5H9R7 873 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 SPDYCQ5MJ68 293 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 TXNRD3NBQ6F5E7 133 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 ATP11CQ8NB49 1132 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 FAM129BQ96TA1 746 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 CD93Q9NPY3 652 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 CWC15Q9P013 229 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 NCDNQ9UBB6 729 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 CYP8B1Q9UNU6 501 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 GPR179Q6PRD1 2367 aa18.64■□□□□ 0.57
PDLIM7-209ENST00000503346 ZFHX2Q9C0A1 2572 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 USP34Q70CQ2 3546 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 SOWAHDA6NJG2 315 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 H3BRJ5 948 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 K7ERQ8 282 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 RNASEH1O60930 286 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 ACADMP11310 421 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 VAV1P15498 845 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 OXTRP30559 389 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 SERPINH1P50454 418 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 TPMTP51580 245 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 DPYSQ14117 519 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 SPA17Q15506 151 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 PARP15Q460N3 678 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 ACCSLQ4AC99 568 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 LINGO4Q6UY18 593 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 POLNQ7Z5Q5 900 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 CACUL1Q86Y37 369 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 CPNE8Q86YQ8 564 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 STK40Q8N2I9 435 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 HSPH1Q92598 858 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 CEP44Q9C0F1 390 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 SCML1Q9UN30 329 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 PCDHA13Q9Y5I0 950 aa18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 EPN1Q9Y6I3 576 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-209ENST00000503346 DOCK4Q8N1I0 1966 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 PIEZO1Q92508 2521 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 RASA4BC9J798 803 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 MAP3K13O43283 966 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 DAPK3O43293 454 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 RASA4O43374 803 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 SMAD6O43541 496 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 KDELR3O43731 214 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 EPN2O95208 641 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 NDUFA10O95299 355 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 CD160O95971 181 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 DNTTP04053 509 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 ERCC2P18074 760 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 CD6P30203 668 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 ARL4AP40617 200 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 SSR1P43307 286 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 NDST2P52849 883 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 MESDQ14696 234 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 CST6Q15828 149 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 Q6ZVU0 165 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 LPCAT2Q7L5N7 544 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 SPC24Q8NBT2 197 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 FAM71BQ8TC56 605 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 HMCESQ96FZ2 354 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 BAG1Q99933 345 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 KLC2Q9H0B6 622 aa18.62■□□□□ 0.57
PDLIM7-209ENST00000503346 LRRC19Q9H756 370 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms