RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NDST1P52848 882 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 CXCL9Q07325 125 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 MYO1HQ8N1T3 1032 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 PRKD2Q9BZL6 878 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 WDR12Q9GZL7 423 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SNX15Q9NRS6 342 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SCAF8Q9UPN6 1271 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 TPH1P17752 444 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 RALGPS1Q5JS13 557 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 ANKRD22Q5VYY1 191 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 FICDQ9BVA6 458 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 UNKQ9C0B0 810 aaKnown RBP17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 A6NHS1 94 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 GOLGA8TH3BQL2 631 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 FAM155BO75949 473 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 CABYRO75952 493 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 NEK3P51956 506 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 CCNG1P51959 295 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 CRADDP78560 199 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 TRAF3Q13114 568 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 GRIK5Q16478 980 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 ARMC4Q5T2S8 1044 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 PRAMEF18Q5VWM3 479 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 HOMEZQ8IX15 550 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 OR8H2Q8N162 312 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 ZNF670Q9BS34 389 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 POLG2Q9UHN1 485 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 DHRS12A0PJE2 317 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 E5RJQ4 531 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ZC3H12BQ5HYM0 836 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 TIGD7Q6NT04 549 aaPredicted RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 C6orf62Q9GZU0 229 aaPredicted RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ATP5F1P24539 256 aaPredicted RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 TM4SF1P30408 202 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CLK2P49760 499 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 RGS4P49798 205 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CCT8P50990 548 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CDH8P55286 799 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 PLIN5Q00G26 463 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 VAC14Q08AM6 782 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CAPSLQ8WWF8 208 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 DNAJC1Q96KC8 554 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 VAT1Q99536 393 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 PIF1Q9H611 641 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CCDC154A6NI56 674 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CYB561D2O14569 222 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 CXCL8P10145 99 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ADSLP30566 484 aaPredicted RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 C15orf59Q2T9L4 293 aaPredicted RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 EGFLAMQ63HQ2 1017 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ASRGL1Q7L266 308 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 APOL4Q9BPW4 351 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 IL22Q9GZX6 179 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 UBP1Q9NZI7 540 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 MPP6Q9NZW5 540 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 TAF6P49848 677 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ADGRE1Q14246 886 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ERI1Q8IV48 349 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 ITFG1Q8TB96 612 aa17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 UBQLN1Q9UMX0 589 aaKnown RBP17.48■□□□□ 0.39
HMGXB3-201ENST00000502717 KCNK1O00180 336 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 MSX2P35548 267 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 GJA8P48165 433 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 BACE1P56817 501 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 YWHAZP63104 245 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 POU6F1Q14863 301 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 SHISA4Q96DD7 197 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 C1orf21Q9H246 121 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 PKP3Q9Y446 797 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 ZSCAN9O15535 394 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 FAM20BO75063 409 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 ASLP04424 464 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 CHRM1P11229 460 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 CPB1P15086 417 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 SPANXN2Q5MJ10 180 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 CDCA2Q69YH5 1023 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 ACTRT2Q8TDY3 377 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 REXO4Q9GZR2 422 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 MID1IP1Q9NPA3 183 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 HPS4Q9NQG7 708 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 PPM1HQ9ULR3 514 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 HS6ST1O60243 411 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 IMPDH2P12268 514 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 TMEM26Q6ZUK4 368 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 NOL11Q9H8H0 719 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 TRNAU1APQ9NX07 287 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 ERAP1Q9NZ08 941 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 FAM95CA0A1B0GW59 222 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 KLF11O14901 512 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 LYPLA2O95372 231 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 DCAF4L1Q3SXM0 396 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 FKBP1CQ5VVH2 108 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 KLHDC10Q6PID8 442 aa17.47■□□□□ 0.39
HMGXB3-201ENST00000502717 SCUBE3Q8IX30 993 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms