RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MAJINQ3KP22 176 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 KBTBD12Q3ZCT8 623 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 C19orf54Q5BKX5 351 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 C9orf152Q5JTZ5 239 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CBWD5Q5RIA9 395 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CCBE1Q6UXH8 406 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CHST9Q7L1S5 443 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 TAS1R1Q7RTX1 841 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 DNAAF5Q86Y56 855 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PLA2G15Q8NCC3 412 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 FBXO15Q8NCQ5 510 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PIK3C3Q8NEB9 887 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 KIF18AQ8NI77 898 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZCCHC10Q8TBK6 192 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 WDR60Q8WVS4 1066 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 KCNE4Q8WWG9 221 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MRPS27Q92552 414 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC7A6OSQ96CW6 309 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CCDC114Q96M63 670 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 WDFY2Q96P53 400 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 CPEB1Q9BZB8 566 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MCOLN1Q9GZU1 580 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 TMEM168Q9H0V1 697 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 MROH8Q9H579 483 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC32A1Q9H598 525 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SH3BP4Q9P0V3 963 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 NTMQ9P121 344 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 POLKQ9UBT6 870 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 TRPS1Q9UHF7 1281 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLCO3A1Q9UIG8 710 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC45A2Q9UMX9 530 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 HPSEQ9Y251 543 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 RCE1Q9Y256 329 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PTRH2Q9Y3E5 179 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 PLEKHM1Q9Y4G2 1056 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 OAS3Q9Y6K5 1087 aaKnown RBP4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 OVOS2A0A0G2JMS6 1433 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 TNS2Q63HR2 1409 aa4.53□□□□□ -1.68
HMGB1P21-201ENST00000502313 RGPD3A6NKT7 1758 aaPredicted RBP4.53□□□□□ -1.69
HMGB1P21-201ENST00000502313 LTN1O94822 1766 aa4.53□□□□□ -1.69
HMGB1P21-201ENST00000502313 RGPD4Q7Z3J3 1758 aa4.53□□□□□ -1.69
HMGB1P21-201ENST00000502313 KDRP35968 1356 aa4.53□□□□□ -1.69
HMGB1P21-201ENST00000502313 RGPD1P0DJD0 1748 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 RREB1Q92766 1687 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 COL3A1P02461 1466 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 OR2W5A6NFC9 320 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SAC3D1A6NKF1 404 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 AKR1B15C9JRZ8 316 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CTDSP2O14595 271 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PLSCR1O15162 318 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZSCAN9O15535 394 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 DHHO43323 396 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ITGA10O75578 1167 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 KIF20AO95235 890 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 GCNT3O95395 438 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 HEXBP07686 556 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 WEE2P0C1S8 567 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC175P0C221 793 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 RAP2AP10114 183 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 RPS2P15880 293 aaKnown RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 HOXA11P31270 313 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 GUCY1A2P33402 732 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CPA2P48052 419 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 IRAK1P51617 712 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 EPHB3P54753 998 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CDH8P55286 799 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PTH1RQ03431 593 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 KRT17Q04695 432 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SF3A3Q12874 501 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 RPA4Q13156 261 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SGCGQ13326 291 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 TOP3AQ13472 1001 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 BOP1Q14137 746 aaKnown RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 USP10Q14694 798 aaKnown RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CRYMQ14894 314 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PCOLCEQ15113 449 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 NTRK2Q16620 822 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC9B1Q4ZJI4 515 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CRB2Q5IJ48 1285 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ATXN7L2Q5T6C5 722 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 MANEALQ5VSG8 457 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 DGAT2L7PQ6IED9 249 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 KRT80Q6KB66 452 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PRR23BQ6ZRT6 265 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 CHST3Q7LGC8 479 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 OTOAQ7RTW8 1153 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 USP37Q86T82 979 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PEX5LQ8IYB4 626 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 DPP10Q8N608 796 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 LINC00482Q8N8I6 264 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SYT2Q8N9I0 419 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ANKRD20A12PQ8NF67 263 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 OR5M3Q8NGP4 307 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SPATA20Q8TB22 786 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 FBXO30Q8TB52 745 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 MR1Q95460 341 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 BICD1Q96G01 975 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PDLIM5Q96HC4 596 aaKnown RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SIGLEC10Q96LC7 697 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms