RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 TCP10LQ8TDR4 215 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 ZNF606Q8WXB4 792 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CDCA5Q96FF9 252 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 SERAC1Q96JX3 654 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CAPNS2Q96L46 248 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PSMG3-AS1Q96PY0 264 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TAAR1Q96RJ0 339 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 HAPLN3Q96S86 360 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PDCD2LQ9BRP1 358 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 HEMGNQ9BXL5 484 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 SEMA6CQ9H3T2 930 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 FAM124BQ9H5Z6 455 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 STN1Q9H668 368 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 PXMP2Q9NR77 195 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 SLC17A7Q9P2U7 560 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 ZNF70Q9UC06 446 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 TBK1Q9UHD2 729 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 GTF2IRD1Q9UHL9 959 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TMEFF2Q9UIK5 374 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 WNT9AO14904 365 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CASQ2O14958 399 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 WDR46O15213 610 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 CHADO15335 359 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PEX1O43933 1283 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CCNT2O60583 730 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 MSCO60682 206 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 ENTPD5O75356 428 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 STAM2O75886 525 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TM7SF2O76062 418 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 HAUS5O94927 633 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 RTN3O95197 1032 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 ASS1P00966 412 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 KRT4P19013 534 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 KDELR1P24390 212 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 ICAM3P32942 547 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CTSKP43235 329 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 NUMBP49757 651 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 SEPHS1P49903 392 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 ARFIP2P53365 341 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CACNB3P54284 484 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 ACTR3P61158 418 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TCP10Q12799 353 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 FOXD4Q12950 439 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 PDIA2Q13087 525 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 DMP1Q13316 513 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 DPYSL3Q14195 570 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 KPNB1Q14974 876 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 ARHGEF6Q15052 776 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TARBP2Q15633 366 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 USP41Q3LFD5 358 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 RABGAP1LQ5R372 815 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 FYB2Q5VWT5 728 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TXNRD3NBQ6F5E7 133 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CCDC174Q6PII3 467 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CRTC3Q6UUV7 619 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 CYP4V2Q6ZWL3 525 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 IGDCC3Q8IVU1 814 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 MCUQ8NE86 351 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 WDR60Q8WVS4 1066 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TEKT4Q8WW24 435 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 DIO2Q92813 273 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 OXNAD1Q96HP4 312 aaPredicted RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 NLRP4Q96MN2 994 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PAFAH2Q99487 392 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PI4K2AQ9BTU6 479 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 YIPF2Q9BWQ6 316 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TMEM120AQ9BXJ8 343 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 DHX33Q9H6R0 707 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 TDRD3Q9H7E2 651 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 USP29Q9HBJ7 922 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 C1orf112Q9NSG2 853 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 DNAJC17Q9NVM6 304 aaKnown RBP4.04□□□□□ -1.76
CLTC-209ENST00000498711 HEY2Q9UBP5 337 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PLLPQ9Y342 182 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 TTLL3Q9Y4R7 772 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 NUB1Q9Y5A7 615 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 PCDHA10Q9Y5I2 948 aa4.04□□□□□ -1.76
CLTC-209ENST00000498711 IQANK1A0A1B0GTG1 560 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 TCRBV7S3A2A0A539 114 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 SDR42E2A6NKP2 422 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 BTBD19C9JJ37 291 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 NFIBO00712 420 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 ATP2A1O14983 1001 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 FKBP6O75344 327 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 KRT36O76013 467 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 TMEM63AO94886 807 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 PENKP01210 267 aaPredicted RBP4.03□□□□□ -1.76
CLTC-209ENST00000498711 LTFP02788 710 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 SOD2P04179 222 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 KRT1P04264 644 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 RBP3P10745 1247 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 KRT10P13645 584 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 KRT15P19012 456 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 CD58P19256 250 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 AOC1P19801 751 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 CA4P22748 312 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 PRDX6P30041 224 aa4.03□□□□□ -1.76
CLTC-209ENST00000498711 STIP1P31948 543 aaKnown RBP4.03□□□□□ -1.76
CLTC-209ENST00000498711 RPL7AP62424 266 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms