RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GABREP78334 506 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 LRRC63Q05C16 580 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 KCNMA1Q12791 1236 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 TAF5Q15542 800 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 DLG2Q15700 870 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 TAF1BQ53T94 588 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 PIP5KL1Q5T9C9 394 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 TTC39BQ5VTQ0 682 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 FBXL22Q6P050 247 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 ATP6V0D2Q8N8Y2 350 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 KREMEN1Q96MU8 473 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 ZNF578Q96N58 590 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 TRIM62Q9BVG3 475 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 SLC4A5Q9BY07 1137 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 PREBQ9HCU5 417 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 KLHL11Q9NVR0 708 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 SLC25A13Q9UJS0 675 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 SYNJ2BP-COX16A0A087WUM0 186 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 LY6G6EA0A0G2JKS1 128 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 A0A1W2PQU0 124 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 J3QKU1 62 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 MCF2LO15068 1137 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 ALOX15BO15296 676 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 PMM2O15305 246 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 USP12O75317 370 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 PIAS2O75928 621 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 CTSLP07711 333 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 CKMT1AP12532 417 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 ZNF18P17022 549 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 TMPRSS3P57727 454 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 YWHAZP63104 245 aaKnown RBP15.1■□□□□ 0.01
TRAF4-212ENST00000498540 HS1BP3Q53T59 392 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 RABGAP1LQ5R372 815 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 ARHGAP40Q5TG30 622 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 SH2D3CQ8N5H7 860 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 OR13H1Q8NG92 308 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 RPRD1AQ96P16 312 aaPredicted RBP15.1■□□□□ 0.01
TRAF4-212ENST00000498540 NOX5Q96PH1 765 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 FEM1AQ9BSK4 669 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 CALN1Q9BXU9 219 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 SEMA4CQ9C0C4 833 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 FAM204AQ9H8W3 233 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 GDPD2Q9HCC8 539 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■□□□□ 11.3
TRAF4-212ENST00000498540 COX16Q9P0S2 106 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 OR51B4Q9Y5P0 310 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 U3KQA8 63 aa15.1■□□□□ 0.01
TRAF4-212ENST00000498540 MYO18BQ8IUG5 2567 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 RNF103O00237 685 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 CSO75390 466 aaKnown RBP15.09■□□□□ 0.01
TRAF4-212ENST00000498540 DXOO77932 396 aaKnown RBP15.09■□□□□ 0.01
TRAF4-212ENST00000498540 GGCXP38435 758 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 CLDN2P57739 230 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 GCNT1Q02742 428 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 ZNF284Q2VY69 593 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 BROXQ5VW32 411 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 GCNT7Q6ZNI0 430 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 SLC22A18ASQ8N1D0 253 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 STK32AQ8WU08 396 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 ARRDC3Q96B67 414 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 APOLD1Q96LR9 279 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 DEPDC7Q96QD5 511 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 SCAND2PQ9GZW5 306 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-212ENST00000498540 ASCL3Q9NQ33 180 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 DDIT4Q9NX09 232 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 VPS28Q9UK41 221 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 CNTN6Q9UQ52 1028 aa15.09■□□□□ 0.01
TRAF4-212ENST00000498540 MAST4O15021 2626 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 CYSRT1A8MQ03 144 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 MT-CO1P00395 513 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 KRT5P13647 590 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 LSSP48449 732 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 UCNP55089 124 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 OXCT1P55809 520 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 RHDQ02161 417 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 AUHQ13825 339 aaKnown RBP15.08■□□□□ 0
TRAF4-212ENST00000498540 CCDC40Q4G0X9 1142 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 ZNF542PQ5EBM4 170 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 TMEM110Q86TL2 294 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 HORMAD1Q86X24 394 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 FMR1NBQ8N0W7 255 aaPredicted RBP15.08■□□□□ 0
TRAF4-212ENST00000498540 KCNE4Q8WWG9 221 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 CCDC34Q96HJ3 373 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 GSDMAQ96QA5 445 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 OSBPL2Q9H1P3 480 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 THAP9Q9H5L6 903 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 POLR1BQ9H9Y6 1135 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 ACP6Q9NPH0 428 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 NLGN3Q9NZ94 848 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 VANGL2Q9ULK5 521 aa15.08■□□□□ 0
TRAF4-212ENST00000498540 ZFR2Q9UPR6 939 aaKnown RBP15.08■□□□□ 0
TRAF4-212ENST00000498540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.07■□□□□ 0
TRAF4-212ENST00000498540 CAPN8A6NHC0 703 aa15.07■□□□□ 0
TRAF4-212ENST00000498540 K7ERQ8 282 aa15.07■□□□□ 0
TRAF4-212ENST00000498540 KPNA3O00505 521 aaPredicted RBP15.07■□□□□ 0
TRAF4-212ENST00000498540 P4HA2O15460 535 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms