RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 HCN2Q9UL51 889 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
CUX1-210ENST00000497815 ARHGAP42A6NI28 874 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 NCAM2O15394 837 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 TIMM44O43615 452 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 PI15O43692 258 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 KDELR3O43731 214 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 KLF8O95600 359 aaPredicted RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 ZFXP17010 805 aaPredicted RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 DEKP35659 375 aaKnown RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 KIR2DL1P43626 348 aaPredicted RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 ECT2LQ008S8 904 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 FZD5Q13467 585 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 PPP2R5EQ16537 467 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 PTPRNQ16849 979 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 FBXO43Q4G163 708 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 AFMIDQ63HM1 303 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 ARHGAP36Q6ZRI8 547 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 CHPFQ8IZ52 775 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 LZTR1Q8N653 840 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 ALLCQ8N6M5 410 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 ZNF366Q8N895 744 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 RPLP0P6Q8NHW5 317 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 ACE2Q9BYF1 805 aaPredicted RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 CACNA2D2Q9NY47 1150 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 SAE1Q9UBE0 346 aaPredicted RBP12.17□□□□□ -0.46
CUX1-210ENST00000497815 SLC25A13Q9UJS0 675 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 PLA2G4CQ9UP65 541 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 ACTL7AQ9Y615 435 aa12.17□□□□□ -0.46
CUX1-210ENST00000497815 WASH3PC4AMC7 463 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 J3KR12 359 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 K7ERQ8 282 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 CEP104O60308 925 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 MT-CO1P00395 513 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ASLP04424 464 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 HLA-EP13747 358 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 PECAM1P16284 738 aaPredicted RBP12.16□□□□□ -0.46
CUX1-210ENST00000497815 ST8SIA6P61647 398 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ARF5P84085 180 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 SULT2A1Q06520 285 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 SLC10A2Q12908 348 aaPredicted RBP12.16□□□□□ -0.46
CUX1-210ENST00000497815 SERINC3Q13530 473 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ZNF234Q14588 700 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 SERPINA13PQ6UXR4 307 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 BBS12Q6ZW61 710 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 B4GALNT4Q76KP1 1039 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ADAT2Q7Z6V5 191 aaKnown RBP12.16□□□□□ -0.46
CUX1-210ENST00000497815 ATPAF2Q8N5M1 289 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ATP11CQ8NB49 1132 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 UBE2Q2Q8WVN8 375 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 ACDQ96AP0 544 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 C16orf45Q96MC5 204 aaPredicted RBP12.16□□□□□ -0.46
CUX1-210ENST00000497815 FAM118BQ9BPY3 351 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 OSBPL6Q9BZF3 934 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 CARD9Q9H257 536 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 SP110Q9HB58 689 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 POLR3BQ9NW08 1133 aaPredicted RBP12.16□□□□□ -0.46
CUX1-210ENST00000497815 DTLQ9NZJ0 730 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 SLCO3A1Q9UIG8 710 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 STARD13Q9Y3M8 1113 aa12.16□□□□□ -0.46
CUX1-210ENST00000497815 TCRBV7S2A1N4TA0A589 114 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 CTAGE9A4FU28 777 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 TTC34A8MYJ7 566 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 ZMPSTE24O75844 475 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 TJP3O95049 919 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 AOC1P19801 751 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 TGM2P21980 687 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 PRKCHP24723 683 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 PTPN7P35236 360 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 IL12RB1P42701 662 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 MRPS21P82921 87 aaKnown RBP12.15□□□□□ -0.46
CUX1-210ENST00000497815 GALNT2Q10471 571 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 SDE2Q6IQ49 451 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 RETSATQ6NUM9 610 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 SYT10Q6XYQ8 523 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 SYNPOQ8N3V7 929 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 IL17RCQ8NAC3 791 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 TXNDC5Q8NBS9 432 aaKnown RBP12.15□□□□□ -0.46
CUX1-210ENST00000497815 CCNYQ8ND76 341 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 P3H4Q92791 437 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 CLDN23Q96B33 292 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 MRGPRX3Q96LB0 322 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 NAPGQ99747 312 aaPredicted RBP12.15□□□□□ -0.46
CUX1-210ENST00000497815 MTG2Q9H4K7 406 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 PRDM16Q9HAZ2 1276 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 THAP10Q9P2Z0 257 aaPredicted RBP12.15□□□□□ -0.46
CUX1-210ENST00000497815 IPO11Q9UI26 975 aaKnown RBP12.15□□□□□ -0.46
CUX1-210ENST00000497815 SNX12Q9UMY4 172 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 RAD54BQ9Y620 910 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 STON1Q9Y6Q2 735 aa12.15□□□□□ -0.46
CUX1-210ENST00000497815 DOCK4Q8N1I0 1966 aa12.14□□□□□ -0.47
CUX1-210ENST00000497815 SGK1O00141 431 aa12.14□□□□□ -0.47
CUX1-210ENST00000497815 FANCGO15287 622 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms