RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TIGD7Q6NT04 549 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CMC1Q7Z7K0 106 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 CFAP61Q8NHU2 1237 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 ATXN7L3BQ96GX2 97 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 TMEM209Q96SK2 561 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 AGAP2Q99490 1192 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 MAGED2Q9UNF1 606 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 APOBEC2Q9Y235 224 aaKnown RBP11.29□□□□□ -0.6
CMSS1-208ENST00000496116 SQORQ9Y6N5 450 aa11.29□□□□□ -0.6
CMSS1-208ENST00000496116 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 B2RBV5 119 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 SPECC1L-ADORA2AF8WAN1 911 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 ITM2AO43736 263 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 ENTPD5O75356 428 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 PAGE1O75459 146 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
CMSS1-208ENST00000496116 ABCE1P61221 599 aaKnown RBP11.28□□□□□ -0.6
CMSS1-208ENST00000496116 RCN2Q14257 317 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 PPP2R5DQ14738 602 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 PCID2Q5JVF3 399 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 PCSK9Q8NBP7 692 aaKnown RBP11.28□□□□□ -0.6
CMSS1-208ENST00000496116 ZSCAN18Q8TBC5 510 aaPredicted RBP11.28□□□□□ -0.6
CMSS1-208ENST00000496116 URGCPQ8TCY9 931 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 FCRL5Q96RD9 977 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 TBL1YQ9BQ87 522 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 EBF4Q9BQW3 602 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 KIFC1Q9BW19 673 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 CCDC106Q9BWC9 280 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 IARS2Q9NSE4 1012 aaKnown RBP11.28□□□□□ -0.6
CMSS1-208ENST00000496116 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 GABRQQ9UN88 632 aa11.28□□□□□ -0.6
CMSS1-208ENST00000496116 MATN3O15232 486 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 MAGEC1O60732 1142 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 H2AFYO75367 372 aaKnown RBP11.27□□□□□ -0.6
CMSS1-208ENST00000496116 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.6
CMSS1-208ENST00000496116 NEBLO76041 1014 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 KLHL2O95198 593 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 PRKCGP05129 697 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 APOA4P06727 396 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 MYL4P12829 197 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 TPH1P17752 444 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 GM2AP17900 193 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 CACNB2Q08289 660 aaPredicted RBP11.27□□□□□ -0.6
CMSS1-208ENST00000496116 ITGA9Q13797 1035 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 UGP2Q16851 508 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 ANO4Q32M45 955 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 DNAL1Q4LDG9 190 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 TLDC1Q6P9B6 456 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 OTOP3Q7RTS5 596 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 LRRC49Q8IUZ0 686 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 CNTD1Q8N815 330 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 VPS39Q96JC1 886 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 FCRL2Q96LA5 508 aaPredicted RBP11.27□□□□□ -0.6
CMSS1-208ENST00000496116 SERPINB11Q96P15 392 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 PGLYRP2Q96PD5 576 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 DNAJC28Q9NX36 388 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 NKX1-2Q9UD57 310 aaPredicted RBP11.27□□□□□ -0.6
CMSS1-208ENST00000496116 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 NEU3Q9UQ49 428 aa11.27□□□□□ -0.6
CMSS1-208ENST00000496116 TNFRSF10BO14763 440 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 INPPL1O15357 1258 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 ITGB1P05556 798 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 GNAZP19086 355 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 CST5P28325 142 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-208ENST00000496116 NMBRP28336 390 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 PGM1P36871 562 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 HARS2P49590 506 aaKnown RBP11.27□□□□□ -0.61
CMSS1-208ENST00000496116 GEMP55040 296 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 KDSRQ06136 332 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 FAM26DQ5JW98 314 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 C6orf163Q5TEZ5 329 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 MANEALQ5VSG8 457 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 GLB1LQ6UWU2 654 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 LCA5Q86VQ0 697 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 TREML1Q86YW5 311 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 CCDC117Q8IWD4 279 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-208ENST00000496116 ARHGAP12Q8IWW6 846 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
CMSS1-208ENST00000496116 TTC8Q8TAM2 541 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 CASP10Q92851 521 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 STMN2Q93045 179 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 ARHGAP39Q9C0H5 1083 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 GLOD4Q9HC38 313 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 TLK1Q9UKI8 766 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.61
CMSS1-208ENST00000496116 TMEM114B3SHH9 223 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 H0Y3Z8 333 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 MAFKO60675 156 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 C2P06681 752 aa11.26□□□□□ -0.61
CMSS1-208ENST00000496116 AOC1P19801 751 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms