RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MBD3O95983 291 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 MMP8P22894 467 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 OR1E1P30953 314 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 ATP11AP98196 1134 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 UBXN1Q04323 297 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 CCDC15Q0P6D6 951 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 CCDC183Q5T5S1 534 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 TRNP1Q6NT89 227 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 BNIPLQ7Z465 357 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 PHLDB2Q86SQ0 1253 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 FAM131BQ86XD5 332 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 ATP11CQ8NB49 1132 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 RXFP2Q8WXD0 754 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 CDC6Q99741 560 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 EBF2Q9HAK2 575 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 AASDHPPTQ9NRN7 309 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 METTL5Q9NRN9 209 aaKnown RBP13.07□□□□□ -0.32
PTPRF-214ENST00000496043 TMPRSS4Q9NRS4 437 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 MPP6Q9NZW5 540 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 APOBEC2Q9Y235 224 aaKnown RBP13.07□□□□□ -0.32
PTPRF-214ENST00000496043 HS3ST2Q9Y278 367 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 NEUROG3Q9Y4Z2 214 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 LAMA1P25391 3075 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 CACNA1EQ15878 2313 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 NUMA1Q14980 2115 aa13.07□□□□□ -0.32
PTPRF-214ENST00000496043 MUC22E2RYF6 1773 aaPredicted RBP13.07□□□□□ -0.32
PTPRF-214ENST00000496043 ILVBLA1L0T0 632 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 LGALS16A8MUM7 142 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 EPHB6O15197 1021 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 FLRT2O43155 660 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SLC7A4O43246 635 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 BNIP3LO60238 219 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SNAP91O60641 907 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 MT-CO1P00395 513 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 C1QTNF9P0C862 333 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SRCP12931 536 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 CD38P28907 300 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SDC4P31431 198 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 ADRA1BP35368 520 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 DRD3P35462 400 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 CTSKP43235 329 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 ADPRHP54922 357 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 CCDC14Q49A88 953 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SLC45A4Q5BKX6 768 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 UNQ6494/PRO21346Q6UXR6 183 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 ZNF783Q6ZMS7 281 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 Q6ZVU0 165 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 TFAP2DQ7Z6R9 452 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 GLRX5Q86SX6 157 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 PRPF39Q86UA1 669 aaKnown RBP13.06□□□□□ -0.32
PTPRF-214ENST00000496043 EMC1Q8N766 993 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 PIP4K2CQ8TBX8 421 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SLC6A18Q96N87 628 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 ERGIC2Q96RQ1 377 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 PCDHB18PQ96TA0 734 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 PSMB7Q99436 277 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 C11orf70Q9BRQ4 267 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SPON2Q9BUD6 331 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 ZYG11BQ9C0D3 744 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 ADAM22Q9P0K1 906 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 PPARGC1AQ9UBK2 798 aaKnown RBP13.06□□□□□ -0.32
PTPRF-214ENST00000496043 VPS51Q9UID3 782 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 SARDHQ9UL12 918 aa13.06□□□□□ -0.32
PTPRF-214ENST00000496043 A0A0D9SEW6 157 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 FAM221BA6H8Z2 402 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 C10orf142B7Z368 130 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 H0Y8X5 98 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 PCDHGA12O60330 932 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 RTN2O75298 545 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 KRT37O76014 449 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 CCDC172P0C7W6 258 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 FTH1P19P0C7X4 201 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 KRT3P12035 628 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 UNGP13051 313 aaPredicted RBP13.05□□□□□ -0.32
PTPRF-214ENST00000496043 CHRNA3P32297 505 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 NUDT1P36639 197 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 NSFP46459 744 aaKnown RBP13.05□□□□□ -0.32
PTPRF-214ENST00000496043 CCT8P50990 548 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 CLCN6P51797 869 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 CNTN1Q12860 1018 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 KCNT1Q5JUK3 1230 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 RETSATQ6NUM9 610 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 LAYNQ6UX15 382 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 RAB44Q7Z6P3 723 aaPredicted RBP13.05□□□□□ -0.32
PTPRF-214ENST00000496043 DCAF4L2Q8NA75 395 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 TMIEQ8NEW7 156 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 ADAMTS14Q8WXS8 1223 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 FAM131CQ96AQ9 280 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 SERAC1Q96JX3 654 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 NAT10Q9H0A0 1025 aaKnown RBP13.05□□□□□ -0.32
PTPRF-214ENST00000496043 OSBPL2Q9H1P3 480 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 RETREG1Q9H6L5 497 aa13.05□□□□□ -0.32
PTPRF-214ENST00000496043 OR12D3Q9UGF7 316 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms