RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 CALN1Q9BXU9 219 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 FBRSQ9HAH7 460 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 KLHL11Q9NVR0 708 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 DDX56Q9NY93 547 aaKnown RBP12.77□□□□□ -0.37
TRA2A-209ENST00000494255 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 SALL4Q9UJQ4 1053 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 PCDHGA2Q9Y5H1 932 aa12.77□□□□□ -0.37
TRA2A-209ENST00000494255 CCDC163A0A0D9SF12 145 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 EDDM13A0A1B0GTR0 161 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 MACROD2A1Z1Q3 448 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 LRRD1A4D1F6 860 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 ARHGAP42A6NI28 874 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 RASA4BC9J798 803 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 AXIN1O15169 862 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 RASA4O43374 803 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 KRT86O43790 486 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 AMPD1P23109 780 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 SLC20A2Q08357 652 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 CAMK2GQ13555 558 aaPredicted RBP12.76□□□□□ -0.37
TRA2A-209ENST00000494255 HNRNPA1L2Q32P51 320 aaKnown RBP12.76□□□□□ -0.37
TRA2A-209ENST00000494255 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 LONP2Q86WA8 852 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 ATP11CQ8NB49 1132 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 TSC1Q92574 1164 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 MYO19Q96H55 970 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 ACE2Q9BYF1 805 aaPredicted RBP12.76□□□□□ -0.37
TRA2A-209ENST00000494255 EBF1Q9UH73 591 aa12.76□□□□□ -0.37
TRA2A-209ENST00000494255 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRA2A-209ENST00000494255 CKAP5Q14008 2032 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 CHD5Q8TDI0 1954 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
TRA2A-209ENST00000494255 ZSCAN5CA6NGD5 496 aaPredicted RBP12.75□□□□□ -0.37
TRA2A-209ENST00000494255 KDELR3O43731 214 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 ATP9BO43861 1147 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 KRT1P04264 644 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 GLDCP23378 1020 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 SERPINB6P35237 376 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 ARSEP51690 589 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 CLCN6P51797 869 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 DMWDQ09019 674 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 SERINC3Q13530 473 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 DPYSL3Q14195 570 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 LINGO4Q6UY18 593 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 RASSF3Q86WH2 238 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 MDGA1Q8NFP4 955 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 OR2T3Q8NH03 318 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 NELL1Q92832 810 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 HMCESQ96FZ2 354 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 CELF6Q96J87 481 aaKnown RBP12.75□□□□□ -0.37
TRA2A-209ENST00000494255 PDLIM2Q96JY6 352 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 GOLPH3Q9H4A6 298 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 NOL6Q9H6R4 1146 aaKnown RBP12.75□□□□□ -0.37
TRA2A-209ENST00000494255 PRSS16Q9NQE7 514 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 HS3ST2Q9Y278 367 aa12.75□□□□□ -0.37
TRA2A-209ENST00000494255 ARIH1Q9Y4X5 557 aaPredicted RBP12.75□□□□□ -0.37
TRA2A-209ENST00000494255 CXorf51AA0A1B0GTR3 108 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 DCLK1O15075 740 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 RNASEH1O60930 286 aaKnown RBP12.74□□□□□ -0.37
TRA2A-209ENST00000494255 ZMPSTE24O75844 475 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 CD48P09326 243 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 GABRG2P18507 467 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 KDELR1P24390 212 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 DLG2Q15700 870 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 ANKRD20A8PQ5CZ79 823 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 KIAA1324Q6UXG2 1013 aaKnown RBP12.74□□□□□ -0.37
TRA2A-209ENST00000494255 SYCE1Q8N0S2 351 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
TRA2A-209ENST00000494255 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 RAPGEF5Q92565 580 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 CCDC114Q96M63 670 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 TPSD1Q9BZJ3 242 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 LRRC19Q9H756 370 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 PRDM16Q9HAZ2 1276 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 CD248Q9HCU0 757 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 RAPGEFL1Q9UHV5 662 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 GUCA1BQ9UMX6 200 aa12.74□□□□□ -0.37
TRA2A-209ENST00000494255 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
TRA2A-209ENST00000494255 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 ZNF487B1APH4 448 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 DFFAO00273 331 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SIN3BO75182 1162 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 MT-CO1P00395 513 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SRCP12931 536 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 NDUFV2P19404 249 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 CNR2P34972 360 aa12.73□□□□□ -0.37
TRA2A-209ENST00000494255 SERPINH1P50454 418 aaKnown RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 BYSLQ13895 437 aaKnown RBP12.73□□□□□ -0.37
TRA2A-209ENST00000494255 USP39Q53GS9 565 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms