RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 OR4C6Q8NH72 309 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 GSDMAQ96QA5 445 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 FEM1AQ9BSK4 669 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 SCAND2PQ9GZW5 306 aaPredicted RBP14.08□□□□□ -0.16
SAMM50-204ENST00000493161 POPDC2Q9HBU9 364 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 CPNE5Q9HCH3 593 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 COX16Q9P0S2 106 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 CNTN6Q9UQ52 1028 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 OR51B4Q9Y5P0 310 aa14.08□□□□□ -0.16
SAMM50-204ENST00000493161 LY6G6EA0A0G2JKS1 128 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 A0A1B0GVM2 712 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 A0A1W2PQU0 124 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 TCAF2A6NFQ2 919 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 K7ERQ8 282 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 MCF2LO15068 1137 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 SART1O43290 800 aaKnown RBP14.07□□□□□ -0.16
SAMM50-204ENST00000493161 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
SAMM50-204ENST00000493161 MT-CO1P00395 513 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 THEGLP0DJG4 465 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 KRT5P13647 590 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF18P17022 549 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 ACADSBP45954 432 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 CLDN2P57739 230 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 DAB2P98082 770 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 E2F1Q01094 437 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 CFHR1Q03591 330 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 KCNMA1Q12791 1236 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF284Q2VY69 593 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 CCDC40Q4G0X9 1142 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF542PQ5EBM4 170 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 FAM46CQ5VWP2 391 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 CDCP2Q5VXM1 449 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 DSG4Q86SJ6 1040 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 C14orf80Q86SX3 495 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 DEFB106AQ8N104 65 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 OR13H1Q8NG92 308 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 SPATA20Q8TB22 786 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 STK32AQ8WU08 396 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 ARRDC3Q96B67 414 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 HIC2Q96JB3 615 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 RPRD1AQ96P16 312 aaPredicted RBP14.07□□□□□ -0.16
SAMM50-204ENST00000493161 LGMNQ99538 433 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 OSBPL2Q9H1P3 480 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.07□□□□□ -0.16
SAMM50-204ENST00000493161 SLC25A13Q9UJS0 675 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 U3KQA8 63 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF462Q96JM2 2506 aa14.07□□□□□ -0.16
SAMM50-204ENST00000493161 OPA1O60313 960 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 SNAP91O60641 907 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 GRAP2O75791 330 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 NUDT1P36639 197 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
SAMM50-204ENST00000493161 AUHQ13825 339 aaKnown RBP14.06□□□□□ -0.16
SAMM50-204ENST00000493161 RABGAP1LQ5R372 815 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 SLC22A18ASQ8N1D0 253 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 WDTC1Q8N5D0 677 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 SH2D3CQ8N5H7 860 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF606Q8WXB4 792 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 RNF34Q969K3 372 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 APOLD1Q96LR9 279 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 CEP63Q96MT8 703 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 PSMB7Q99436 277 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 CALN1Q9BXU9 219 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 SEMA4CQ9C0C4 833 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 INTS2Q9H0H0 1204 aaKnown RBP14.06□□□□□ -0.16
SAMM50-204ENST00000493161 THAP9Q9H5L6 903 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 PREBQ9HCU5 417 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 KLHL11Q9NVR0 708 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 DDIT4Q9NX09 232 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 VPS28Q9UK41 221 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 VANGL2Q9ULK5 521 aa14.06□□□□□ -0.16
SAMM50-204ENST00000493161 ZFR2Q9UPR6 939 aaKnown RBP14.06□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
SAMM50-204ENST00000493161 CYSRT1A8MQ03 144 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 C1QTNF3-AMACRE9PGA6 284 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 ALOX15BO15296 676 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SMAD6O43541 496 aaKnown RBP14.05□□□□□ -0.16
SAMM50-204ENST00000493161 USP12O75317 370 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 PIAS2O75928 621 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 CNTN5O94779 1100 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 CKMT1AP12532 417 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SRCP12931 536 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 GABREP78334 506 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
SAMM50-204ENST00000493161 PDCLQ13371 301 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 ARHGAP40Q5TG30 622 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 TTC39BQ5VTQ0 682 aaPredicted RBP14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SEL1L3Q68CR1 1132 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 TTI2Q6NXR4 508 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 GCNT7Q6ZNI0 430 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 CHST14Q8NCH0 376 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 ZNF248Q8NDW4 579 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 OR2A12Q8NGT7 310 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SMARCE1Q969G3 411 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 SLC2A13Q96QE2 648 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 MED15Q96RN5 788 aa14.05□□□□□ -0.16
SAMM50-204ENST00000493161 CPXM1Q96SM3 734 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms