RNA–Protein interactions for RNA: ENST00000492582.5

CHKB-212, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-212ENST00000492582 CREBZFQ9NS37 354 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 TMEM161AQ9NX61 479 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 C2orf71A6NGG8 1288 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 TRAFD1O14545 582 aaPredicted RBP29.4■■■□□ 2.3
CHKB-212ENST00000492582 SYN3O14994 580 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 MATN3O15232 486 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 DNAJB2P25686 324 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 STX3Q13277 289 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 DEFB115Q30KQ5 88 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 HSP90AA5PQ58FG0 334 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 PPM1JQ5JR12 505 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 RTL3Q8N8U3 475 aaKnown RBP29.4■■■□□ 2.3
CHKB-212ENST00000492582 RAET1EQ8TD07 263 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 FTHL17Q9BXU8 183 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 FBXO44Q9H4M3 255 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 GLOD4Q9HC38 313 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 FBXO6Q9NRD1 293 aaPredicted RBP29.4■■■□□ 2.3
CHKB-212ENST00000492582 SNX15Q9NRS6 342 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 KCNK4Q9NYG8 393 aa29.4■■■□□ 2.3
CHKB-212ENST00000492582 PRKCGP05129 697 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 GRK4P32298 578 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 RASSF2P50749 326 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 APLP1P51693 650 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 LHX8Q68G74 356 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 ZCCHC23Q6ZST2 131 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 KCNMB4Q86W47 210 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 ARID3BQ8IVW6 561 aaPredicted RBP29.39■■■□□ 2.3
CHKB-212ENST00000492582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP29.39■■■□□ 2.3
CHKB-212ENST00000492582 SLC39A13Q96H72 371 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 LNPEPQ9UIQ6 1025 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 TLR6Q9Y2C9 796 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 PCDHB5Q9Y5E4 795 aa29.39■■■□□ 2.3
CHKB-212ENST00000492582 A8MUI8 341 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 ZBTB16Q05516 673 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 MBLAC2Q68D91 279 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 CRLF3Q8IUI8 442 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 PXYLP1Q8TE99 480 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 CAPNS2Q96L46 248 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 MPP6Q9NZW5 540 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 PROCP04070 461 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 NMBRP28336 390 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 SERPINB8P50452 374 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 MLLT6P55198 1093 aaPredicted RBP29.38■■■□□ 2.29
CHKB-212ENST00000492582 USP46P62068 366 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 RPL10AP62906 217 aaKnown RBP29.38■■■□□ 2.29
CHKB-212ENST00000492582 CDK18Q07002 472 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 ICE2Q659A1 982 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 CMC1Q7Z7K0 106 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 AZIN2Q96A70 460 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 C1orf74Q96LT6 269 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 TBL1YQ9BQ87 522 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 KIFC1Q9BW19 673 aa29.38■■■□□ 2.29
CHKB-212ENST00000492582 C20orf96Q9NUD7 363 aaPredicted RBP29.38■■■□□ 2.29
CHKB-212ENST00000492582 MRPL42Q9Y6G3 142 aaKnown RBP29.38■■■□□ 2.29
CHKB-212ENST00000492582 WASH4PA8MWX3 477 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 HNRNPCL1O60812 293 aaKnown RBP29.37■■■□□ 2.29
CHKB-212ENST00000492582 MT-CYBP00156 380 aaPredicted RBP29.37■■■□□ 2.29
CHKB-212ENST00000492582 FGF3P11487 239 aaPredicted RBP29.37■■■□□ 2.29
CHKB-212ENST00000492582 MAGEA11P43364 429 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 CTXN3Q4LDR2 81 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 PIK3R6Q5UE93 754 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 FSTL4Q6MZW2 842 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 TIGD7Q6NT04 549 aaPredicted RBP29.37■■■□□ 2.29
CHKB-212ENST00000492582 LRRC8DQ7L1W4 858 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 PRR11Q96HE9 360 aaPredicted RBP29.37■■■□□ 2.29
CHKB-212ENST00000492582 THAP1Q9NVV9 213 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 GMIPQ9P107 970 aa29.37■■■□□ 2.29
CHKB-212ENST00000492582 ANXA9O76027 345 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 COL6A1P12109 1028 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 PCLAFQ15004 111 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 HSF5Q4G112 596 aaPredicted RBP29.36■■■□□ 2.29
CHKB-212ENST00000492582 ARHGAP18Q8N392 663 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 ATXN7L3BQ96GX2 97 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 MCMBPQ9BTE3 642 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 TMEM216Q9P0N5 145 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 HBS1LQ9Y450 684 aaKnown RBP29.36■■■□□ 2.29
CHKB-212ENST00000492582 TTC3P53804 2025 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 NYNRINQ9P2P1 1898 aaKnown RBP29.36■■■□□ 2.29
CHKB-212ENST00000492582 VWA8A3KMH1 1905 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 F7P08709 466 aaPredicted RBP29.36■■■□□ 2.29
CHKB-212ENST00000492582 CSE1LP55060 971 aaKnown RBP29.36■■■□□ 2.29
CHKB-212ENST00000492582 MPP3Q13368 585 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 MRPL58Q14197 206 aaKnown RBP29.36■■■□□ 2.29
CHKB-212ENST00000492582 TTC9BQ8N6N2 239 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 PPP1R14CQ8TAE6 165 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 ARL8BQ9NVJ2 186 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 IL37Q9NZH6 218 aa29.36■■■□□ 2.29
CHKB-212ENST00000492582 ARVCFO00192 962 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 PTPN4P29074 926 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 GMPRP36959 345 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 CEP57Q86XR8 500 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 ATAD1Q8NBU5 361 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 PTCD3Q96EY7 689 aaKnown RBP29.35■■■□□ 2.29
CHKB-212ENST00000492582 ZNF778Q96MU6 729 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 TUBB6Q9BUF5 446 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 IARS2Q9NSE4 1012 aaKnown RBP29.35■■■□□ 2.29
CHKB-212ENST00000492582 INHAP05111 366 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 HLA-DQB2P05538 268 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 SLC2A3P11169 496 aa29.35■■■□□ 2.29
CHKB-212ENST00000492582 PAPOLAP51003 745 aaKnown RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms