RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 C9orf64Q5T6V5 341 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 TXNRD3NBQ6F5E7 133 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RFX8Q6ZV50 586 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 METTL3Q86U44 580 aaKnown RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 KBTBD6Q86V97 674 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 CACUL1Q86Y37 369 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 CPNE8Q86YQ8 564 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 FRS2Q8WU20 508 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ARHGEF2Q92974 986 aaKnown RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 BAG1Q99933 345 aaPredicted RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PCDHA13Q9Y5I0 950 aa16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 EPN1Q9Y6I3 576 aaPredicted RBP16.66■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 H3BRJ5 948 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 GFRA3O60609 400 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ZMPSTE24O75844 475 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ACADMP11310 421 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 SRCP12931 536 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 BCKDHBP21953 392 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 GJC1P36383 396 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ARL4AP40617 200 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 HCAR3P49019 387 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 CLCN6P51797 869 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 YBEYP58557 167 aaPredicted RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 DLG2Q15700 870 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ELF2Q15723 593 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PLK5Q496M5 336 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ACCSLQ4AC99 568 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ZNF776Q68DI1 518 aaPredicted RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 LAIR1Q6GTX8 287 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RETSATQ6NUM9 610 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 LINGO4Q6UY18 593 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RAD9BQ6WBX8 426 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 UMODL1-AS1Q8N2C9 162 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 FAM160A2Q8N612 972 aaPredicted RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ATP11CQ8NB49 1132 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PTPRN2Q92932 1015 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 ZC3H10Q96K80 434 aaKnown RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 RSPH9Q9H1X1 276 aaPredicted RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 NOL6Q9H6R4 1146 aaKnown RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 CWC15Q9P013 229 aaKnown RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 USP36Q9P275 1121 aaKnown RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 HPCAL4Q9UM19 191 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 NYNRINQ9P2P1 1898 aaKnown RBP16.65■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 PLXND1Q9Y4D7 1925 aa16.64■□□□□ 0.26
MSH5-SAPCD1-206ENST00000491552 IGHV1OR15-9A0A0B4J2B8 117 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 CXorf51AA0A1B0GTR3 108 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 RNASEH1O60930 286 aaKnown RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 RHOBTB1O94844 696 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 MT-CO1P00395 513 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 C7P10643 843 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 VAV1P15498 845 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ERCC2P18074 760 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 GSDMDP57764 484 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 RPS14P62263 151 aaKnown RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ARF5P84085 180 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ZBTB16Q05516 673 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 DPYSQ14117 519 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 KRT81Q14533 505 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 PARP15Q460N3 678 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 SLC36A4Q6YBV0 504 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 Q6ZVU0 165 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 POLNQ7Z5Q5 900 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ALYREFQ86V81 257 aaKnown RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ZNF354CQ86Y25 554 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 TMEM139Q8IV31 216 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 STK40Q8N2I9 435 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 FRMD1Q8N878 549 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 DUSP15Q9H1R2 295 aaPredicted RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 PCDH18Q9HCL0 1135 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 CD93Q9NPY3 652 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 ITM2CQ9NQX7 267 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 NCDNQ9UBB6 729 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 MBD1Q9UIS9 605 aaPredicted RBP16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 GMEB2Q9UKD1 530 aa16.64■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 RASA4BC9J798 803 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 K7ERQ8 282 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 MAP3K13O43283 966 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 RASA4O43374 803 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 KDELR3O43731 214 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 DNTTP04053 509 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 NDST2P52849 883 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 CDH6P55285 790 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 GEMIN4P57678 1058 aaKnown RBP16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 TAS2R40P59535 323 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 PMS2CLQ68D20 193 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 C22orf39Q6P5X5 142 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 OR8D1Q8WZ84 308 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 HMCESQ96FZ2 354 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 CCDC114Q96M63 670 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 CSPG4P5Q96PW8 444 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 FAM129BQ96TA1 746 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 LRRC19Q9H756 370 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 CHD5Q8TDI0 1954 aa16.63■□□□□ 0.25
MSH5-SAPCD1-206ENST00000491552 A0A0A6YYK5 440 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms