RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RNF224P0DH78 156 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 COL8A1P27658 744 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 ETV5P41161 510 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 UQCRFS1P47985 274 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 CD97P48960 835 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 DLG4P78352 724 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 CLDN10P78369 228 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 PIP5KL1Q5T9C9 394 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 FAM46CQ5VWP2 391 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 ATCAYQ86WG3 371 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 HORMAD1Q86X24 394 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 FRS2Q8WU20 508 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 JPH3Q8WXH2 748 aaPredicted RBP14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 OR8D1Q8WZ84 308 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 NAT6Q93015 286 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 BMFQ96LC9 184 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 STRADBQ9C0K7 418 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 GPR27Q9NS67 375 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 RABGEF1Q9UJ41 708 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 PPM1HQ9ULR3 514 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 PCDHB11Q9Y5F2 797 aa14.1□□□□□ -0.15
EXOSC3-207ENST00000490516 POLQO75417 2590 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 CSMD1Q96PZ7 3565 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 A0A087X0B3 334 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 SPTY2D1-AS1A0A0U1RR47 76 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 POM121BA6NF01 834 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 H3BM21 787 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 TULP2O00295 520 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 RIOK3O14730 519 aaKnown RBP14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 TPP1O14773 563 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 EXOC3O60645 756 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 BMP15O95972 392 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 IGLV3-27P01718 113 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 JUNDP17535 347 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 GJB2P29033 226 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 RPIAP49247 311 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 SLC11A2P49281 568 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 AP3M2P53677 418 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 ZNF394Q53GI3 561 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 BSPRYQ5W0U4 402 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 PARGQ86W56 976 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 C9orf43Q8TAL5 461 aaPredicted RBP14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 GFM1Q96RP9 751 aaKnown RBP14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 UBXN6Q9BZV1 441 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 PADI4Q9UM07 663 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 ZFR2Q9UPR6 939 aaKnown RBP14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 LOXL2Q9Y4K0 774 aa14.09□□□□□ -0.15
EXOSC3-207ENST00000490516 TYW5A2RUC4 315 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 YJEFN3A6XGL0 299 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 D6RAR5 112 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 E7ENQ6 273 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 C1QTNF3-AMACRE9PGA6 284 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 H3BQV1 296 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 GCATO75600 419 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 LUC7L3O95232 432 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 KRT7P08729 469 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 ELAVL4P26378 380 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 TNFRSF8P28908 595 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 NNMTP40261 264 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 STAT6P42226 847 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 CCL7P80098 99 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 C1orf61Q13536 156 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 ZACNQ401N2 412 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 TPRG1LQ5T0D9 272 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 SEL1L3Q68CR1 1132 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 DCP2Q8IU60 420 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 CCDC117Q8IWD4 279 aaPredicted RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 RBFAQ8N0V3 343 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 SSC4DQ8WTU2 575 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 TAF4BQ92750 862 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 USP7Q93009 1102 aa14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 HEXIM2Q96MH2 286 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 TCEAL2Q9H3H9 227 aaPredicted RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 APOBEC3GQ9HC16 384 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-207ENST00000490516 A0A1W2PQM1 296 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 C9orf172C9J069 976 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 TMX2-CTNND1H3BSU7 103 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 PCDH8O95206 1070 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 HLA-DRAP01903 254 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 ZNF18P17022 549 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 PIK3CAP42336 1068 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 MAPK10P53779 464 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 MLLT10P55197 1068 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 ADKP55263 362 aaKnown RBP14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 ACCSLQ4AC99 568 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 FHL5Q5TD97 284 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 NEK5Q6P3R8 708 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 UNC45BQ8IWX7 931 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 GLMNQ92990 594 aa14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 NUCKS1Q9H1E3 243 aaKnown RBP14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 ZNF768Q9H5H4 540 aaKnown RBP14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 IPO11Q9UI26 975 aaKnown RBP14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 FBXO2Q9UK22 296 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-207ENST00000490516 A0A1W2PQ27 194 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 A0A1W2PQ64 194 aa14.06□□□□□ -0.16
EXOSC3-207ENST00000490516 A0A1W2PQC6 194 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms