RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SNAP91O60641 907 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 NDUFS2O75306 463 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 PROSCO94903 275 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 OXTRP30559 389 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 ARL4AP40617 200 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 MAGEA1P43355 309 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 GEMIN4P57678 1058 aaKnown RBP15.41■□□□□ 0.06
CXCL12-207ENST00000488591 YBEYP58557 167 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-207ENST00000488591 DLG2Q15700 870 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 DSG4Q86SJ6 1040 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 ZNF354CQ86Y25 554 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 SH2D3CQ8N5H7 860 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 SLC35G2Q8TBE7 412 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 TEKT4Q8WW24 435 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 PTPRN2Q92932 1015 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 ARHGEF2Q92974 986 aaKnown RBP15.41■□□□□ 0.06
CXCL12-207ENST00000488591 CCDC114Q96M63 670 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 RSPH9Q9H1X1 276 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-207ENST00000488591 MTG2Q9H4K7 406 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 SCML1Q9UN30 329 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 NEU3Q9UQ49 428 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 NCKAP1Q9Y2A7 1128 aa15.41■□□□□ 0.06
CXCL12-207ENST00000488591 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
CXCL12-207ENST00000488591 IGHV1OR15-9A0A0B4J2B8 117 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 CXorf51AA0A1B0GTR3 108 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 H3BRJ5 948 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 BCKDHBP21953 392 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 ARHGAP25P42331 645 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 HCAR3P49019 387 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 TPMTP51580 245 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 CLCN6P51797 869 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 RPS14P62263 151 aaKnown RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 RPL6Q02878 288 aaKnown RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 ELAVL3Q14576 367 aaKnown RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 CA9Q16790 459 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 SMTNL2Q2TAL5 461 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 TTC31Q49AM3 519 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 KCNT1Q5JUK3 1230 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 SPDYCQ5MJ68 293 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 DAB2IPQ5VWQ8 1189 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 PMS2CLQ68D20 193 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 RFX8Q6ZV50 586 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 CACUL1Q86Y37 369 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 GPR161Q8N6U8 529 aaKnown RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 FRMD1Q8N878 549 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 GANCQ8TET4 914 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 HSPH1Q92598 858 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 KCTD15Q96SI1 283 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 ACE2Q9BYF1 805 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 OSGEPQ9NPF4 335 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 NDFIP2Q9NV92 336 aa15.4■□□□□ 0.06
CXCL12-207ENST00000488591 USP36Q9P275 1121 aaKnown RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 MBD1Q9UIS9 605 aaPredicted RBP15.4■□□□□ 0.06
CXCL12-207ENST00000488591 SPAG17Q6Q759 2223 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 ZSCAN5CA6NGD5 496 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-207ENST00000488591 BNIP3LO60238 219 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 ZMPSTE24O75844 475 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 LCA5LO95447 670 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 MT-CO1P00395 513 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 RARAP10276 462 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 SRCP12931 536 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 GOT1P17174 413 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 GLDCP23378 1020 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 IL1R2P27930 398 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 CD6P30203 668 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 ACVRL1P37023 503 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 RECQLP46063 649 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-207ENST00000488591 DHPSP49366 369 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-207ENST00000488591 KRT81Q14533 505 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 MESDQ14696 234 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 DPYSL2Q16555 572 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 PARP15Q460N3 678 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 LINGO4Q6UY18 593 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 CYP4V2Q6ZWL3 525 aaPredicted RBP15.39■□□□□ 0.05
CXCL12-207ENST00000488591 TMEFF1Q8IYR6 380 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 UMODL1-AS1Q8N2C9 162 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 STK40Q8N2I9 435 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 SPC24Q8NBT2 197 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 FRS2Q8WU20 508 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 RFFLQ8WZ73 363 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 OR8D1Q8WZ84 308 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.39■□□□□ 0.05
CXCL12-207ENST00000488591 PCDHGA5Q9Y5G8 931 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 PCDHA13Q9Y5I0 950 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 PLXND1Q9Y4D7 1925 aa15.39■□□□□ 0.05
CXCL12-207ENST00000488591 PIEZO1Q92508 2521 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 TMEM110-MUSTN1A8MSY1 372 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 RASA4BC9J798 803 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 ALOX15BO15296 676 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 RASA4O43374 803 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 KDELR3O43731 214 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 LRP3O75074 770 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 MTA2O94776 668 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 EPN2O95208 641 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 ADH1BP00325 375 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 IL1BP01584 269 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 IGLV3-19P01714 112 aa15.38■□□□□ 0.05
CXCL12-207ENST00000488591 KRT7P08729 469 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms