RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 RASA4BC9J798 803 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 ZBTB24O43167 697 aaPredicted RBP20.02■□□□□ 0.8
SEC22A-208ENST00000487572 RASA4O43374 803 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 ARSEP51690 589 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 NRLP54845 237 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 PDK2Q15119 407 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 LEKR1Q6ZMV7 388 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 CACUL1Q86Y37 369 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 MAP7D3Q8IWC1 876 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 UMODL1-AS1Q8N2C9 162 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 ATP11CQ8NB49 1132 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 MDGA1Q8NFP4 955 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 RAPGEF5Q92565 580 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 CALR3Q96L12 384 aaKnown RBP20.02■□□□□ 0.8
SEC22A-208ENST00000487572 TPSD1Q9BZJ3 242 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 SLC6A17Q9H1V8 727 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 ETNK2Q9NVF9 386 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 FAM86C1Q9NVL1 165 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 ZSCAN32Q9NX65 697 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 DONSONQ9NYP3 566 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 SUN2Q9UH99 717 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 HPCAL4Q9UM19 191 aa20.02■□□□□ 0.8
SEC22A-208ENST00000487572 AXIN1O15169 862 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 ZMPSTE24O75844 475 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 MT-CO1P00395 513 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 CCDC175P0C221 793 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 GABRG2P18507 467 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 IFI16Q16666 785 aaKnown RBP20.01■□□□□ 0.79
SEC22A-208ENST00000487572 HNRNPA1L2Q32P51 320 aaKnown RBP20.01■□□□□ 0.79
SEC22A-208ENST00000487572 PARP15Q460N3 678 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 ODF2Q5BJF6 829 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 LRRC38Q5VT99 294 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 RETSATQ6NUM9 610 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 TMCO3Q6UWJ1 677 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 NPWQ8N729 165 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 KDM1BQ8NB78 822 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 FAM71BQ8TC56 605 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 PDLIM2Q96JY6 352 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 ACE2Q9BYF1 805 aaPredicted RBP20.01■□□□□ 0.79
SEC22A-208ENST00000487572 FAM126AQ9BYI3 521 aaPredicted RBP20.01■□□□□ 0.79
SEC22A-208ENST00000487572 SLC39A8Q9C0K1 460 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 CD248Q9HCU0 757 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 PRSS16Q9NQE7 514 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 RCOR3Q9P2K3 495 aaPredicted RBP20.01■□□□□ 0.79
SEC22A-208ENST00000487572 R4GN57 208 aa20.01■□□□□ 0.79
SEC22A-208ENST00000487572 EDDM13A0A1B0GTR0 161 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 GRID2IPA4D2P6 1211 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 K7ERQ8 282 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 DFFAO00273 331 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 DCLK1O15075 740 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 PSTPIP1O43586 416 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 SIN3BO75182 1162 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 SRCP12931 536 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 VAV1P15498 845 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 NDUFV2P19404 249 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 KDELR1P24390 212 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 IL4RP24394 825 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 HOXA6P31267 233 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 NDST2P52849 883 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 YBEYP58557 167 aaPredicted RBP20■□□□□ 0.79
SEC22A-208ENST00000487572 ARF5P84085 180 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 DLG2Q15700 870 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 ANKRD20A8PQ5CZ79 823 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 KIAA1324Q6UXG2 1013 aaKnown RBP20■□□□□ 0.79
SEC22A-208ENST00000487572 LONP2Q86WA8 852 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 SH2D3CQ8N5H7 860 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 KIAA1524Q8TCG1 905 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 RNF25Q96BH1 459 aaPredicted RBP20■□□□□ 0.79
SEC22A-208ENST00000487572 ZNF830Q96NB3 372 aaPredicted RBP20■□□□□ 0.79
SEC22A-208ENST00000487572 ZNF670Q9BS34 389 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 TSGA10Q9BZW7 698 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 KLC2Q9H0B6 622 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 LRRC19Q9H756 370 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 DDX56Q9NY93 547 aaKnown RBP20■□□□□ 0.79
SEC22A-208ENST00000487572 GUCA1BQ9UMX6 200 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 HS3ST2Q9Y278 367 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 ACTL7AQ9Y615 435 aa20■□□□□ 0.79
SEC22A-208ENST00000487572 MYO18AQ92614 2054 aaKnown RBP19.99■□□□□ 0.79
SEC22A-208ENST00000487572 SMAD6O43541 496 aaKnown RBP19.99■□□□□ 0.79
SEC22A-208ENST00000487572 KDELR3O43731 214 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 BNIP3LO60238 219 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 MARCKSL1P49006 195 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 SERINC3Q13530 473 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 CAMK2GQ13555 558 aaPredicted RBP19.99■□□□□ 0.79
SEC22A-208ENST00000487572 WDR5BQ86VZ2 330 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 RASSF3Q86WH2 238 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 PCDH19Q8TAB3 1148 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 NELL1Q92832 810 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 MKRN2Q9H000 416 aaKnown RBP19.99■□□□□ 0.79
SEC22A-208ENST00000487572 IRF2BPLQ9H1B7 796 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 EBF1Q9UH73 591 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 INVSQ9Y283 1065 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 PCDHGA2Q9Y5H1 932 aa19.99■□□□□ 0.79
SEC22A-208ENST00000487572 ARHGAP42A6NI28 874 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 KRT86O43790 486 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 ATP9BO43861 1147 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 PALMO75781 387 aa19.98■□□□□ 0.79
SEC22A-208ENST00000487572 SERPINH1P50454 418 aaKnown RBP19.98■□□□□ 0.79
SEC22A-208ENST00000487572 PAPOLAP51003 745 aaKnown RBP19.98■□□□□ 0.79
SEC22A-208ENST00000487572 COPAP53621 1224 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms