RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 KCNH5Q8NCM2 988 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 Q8NFD4 153 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 OR7D4Q8NG98 312 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SETD6Q8TBK2 473 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CAGE1Q8TC20 777 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 STT3BQ8TCJ2 826 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 HASPINQ8TF76 798 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 AFG1LQ8WV93 481 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 DNAAF4Q8WXU2 420 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SEPT1Q8WYJ6 367 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 FAM162AQ96A26 154 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SDCCAG3Q96C92 435 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 MSANTD3Q96H12 275 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 DYDC2Q96IM9 177 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 TMX3Q96JJ7 454 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 FAM111AQ96PZ2 611 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 PSKH2Q96QS6 385 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SMC6Q96SB8 1091 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 PLIN2Q99541 437 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 APOL6Q9BWW8 343 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 GPR63Q9BZJ6 419 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 TSGA10Q9BZW7 698 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 FTOQ9C0B1 505 aaKnown RBP eCLIP4.68□□□□□ -1.66
RTN4-213ENST00000485749 ZNF518BQ9C0D4 1074 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 ISCUQ9H1K1 167 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 VPS16Q9H269 839 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 ADAM7Q9H2U9 754 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SPATS2LQ9NUQ6 558 aaKnown RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 FKBP14Q9NWM8 211 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 DBR1Q9UK59 544 aaKnown RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 CROTQ9UKG9 612 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 PCDHA6Q9UN73 950 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SATB2Q9UPW6 733 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CHKBQ9Y259 395 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 PCDHA1Q9Y5I3 950 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 FMN1Q68DA7 1419 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CASKIN1Q8WXD9 1431 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 BICRAQ9NZM4 1560 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CARMIL1Q5VZK9 1371 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 NINLQ9Y2I6 1382 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 FGD6Q6ZV73 1430 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SMG6Q86US8 1419 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 TRAV6A0A075B6T7 132 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 A0A1W2PRV1 198 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 OR6C74A6NCV1 312 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 HMX3A6NHT5 357 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 EIF3CLB5ME19 914 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 ATP2A1O14983 1001 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CASC3O15234 703 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 CYTIPO60759 359 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 NIPSNAP2O75323 286 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 METTL18O95568 372 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ECDO95905 644 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 FTCDO95954 541 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 RB1P06400 928 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PRKAR1AP10644 381 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 HSPA8P11142 646 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 C6P13671 934 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ZFXP17010 805 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 TBXAS1P24557 533 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 ALDH4A1P30038 563 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 MAPK4P31152 587 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 BMI1P35226 326 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 THBS2P35442 1172 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SREBF1P36956 1147 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CAPZA2P47755 286 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PIP4K2AP48426 406 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 PPP5CP53041 499 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SLURP1P55000 103 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PER3P56645 1201 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 GSCP56915 257 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 CTXN1P60606 82 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 EIF4A1P60842 406 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 RPS16P62249 146 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 ATP8B2P98198 1209 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CD69Q07108 199 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 MPP3Q13368 585 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 RAB30Q15771 203 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 TBC1D25Q3MII6 688 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PLEKHN1Q494U1 663 aaPredicted RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 FUT11Q495W5 492 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ZNF805Q5CZA5 627 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 MDH1BQ5I0G3 518 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 C3orf38Q5JPI3 329 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SLC9C2Q5TAH2 1124 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 C12orf60Q5U649 245 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SHEQ5VZ18 495 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ETFRF1Q6IPR1 90 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CAVIN1Q6NZI2 390 aaKnown RBP4.67□□□□□ -1.66
RTN4-213ENST00000485749 MTFR2Q6P444 385 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 AAGABQ6PD74 315 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 USP17L6PQ6QN14 398 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 SASS6Q6UVJ0 657 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CLEC2AQ6UVW9 174 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 ISLR2Q6UXK2 745 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 RNF44Q7L0R7 432 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 TAS2R42Q7RTR8 314 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 PPP1R3BQ86XI6 285 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 UNC5CLQ8IV45 518 aa4.67□□□□□ -1.66
RTN4-213ENST00000485749 CD302Q8IX05 232 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms