RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SH2D3CQ8N5H7 860 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 ATP11CQ8NB49 1132 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 HSPH1Q92598 858 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 ARHGEF2Q92974 986 aaKnown RBP16.98■□□□□ 0.31
HMGN1-214ENST00000482733 ERLEC1Q96DZ1 483 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 LOXL4Q96JB6 756 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 NDFIP2Q9NV92 336 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 SCML1Q9UN30 329 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 DMDP11532 3685 aa16.98■□□□□ 0.31
HMGN1-214ENST00000482733 SOWAHDA6NJG2 315 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 GFRA3O60609 400 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 SIN3BO75182 1162 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 KRT7P08729 469 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 OXTRP30559 389 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 NUMBP49757 651 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 MRE11P49959 708 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 GSDMDP57764 484 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 ELAVL3Q14576 367 aaKnown RBP16.97■□□□□ 0.31
HMGN1-214ENST00000482733 DLG2Q15700 870 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 SMTNL2Q2TAL5 461 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 PARP15Q460N3 678 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 PLK5Q496M5 336 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 ACCSLQ4AC99 568 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 ZNF776Q68DI1 518 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-214ENST00000482733 ASCL5Q7RTU5 278 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 FRS2Q8WU20 508 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 RLN3Q8WXF3 142 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 CCDC114Q96M63 670 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 RSPH9Q9H1X1 276 aaPredicted RBP16.97■□□□□ 0.31
HMGN1-214ENST00000482733 ITM2CQ9NQX7 267 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMGN1-214ENST00000482733 USP36Q9P275 1121 aaKnown RBP16.97■□□□□ 0.31
HMGN1-214ENST00000482733 GMEB2Q9UKD1 530 aa16.97■□□□□ 0.31
HMGN1-214ENST00000482733 VPS13AQ96RL7 3174 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 A0A0A6YYK5 440 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 ZSCAN5CA6NGD5 496 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 DCLK1O15075 740 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 MAP3K13O43283 966 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 ZMPSTE24O75844 475 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 DNTTP04053 509 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 SRCP12931 536 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 TCF4P15884 667 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 GOT1P17174 413 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 ACVRL1P37023 503 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 SLC1A1P43005 524 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 NDST2P52849 883 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 HADHBP55084 474 aaKnown RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 RPS14P62263 151 aaKnown RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 MESDQ14696 234 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 TTC31Q49AM3 519 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 SPDYCQ5MJ68 293 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 DSG4Q86SJ6 1040 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 KBTBD6Q86V97 674 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 LZTR1Q8N653 840 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 RUBCNQ92622 972 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 PTPRN2Q92932 1015 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 CALR3Q96L12 384 aaKnown RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 CEP44Q9C0F1 390 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 SLC6A17Q9H1V8 727 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 CWC15Q9P013 229 aaKnown RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 RCOR3Q9P2K3 495 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 INVSQ9Y283 1065 aa16.96■□□□□ 0.31
HMGN1-214ENST00000482733 FARP1Q9Y4F1 1045 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 MUC22E2RYF6 1773 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 MYO18AQ92614 2054 aaKnown RBP16.96■□□□□ 0.31
HMGN1-214ENST00000482733 FANCMQ8IYD8 2048 aa16.96■□□□□ 0.3
HMGN1-214ENST00000482733 RASA4BC9J798 803 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 ALOX15BO15296 676 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 RASA4O43374 803 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 KDELR3O43731 214 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 MT-CO1P00395 513 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 IGLV3-19P01714 112 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 RETP07949 1114 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 ERCC2P18074 760 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 GLDCP23378 1020 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
HMGN1-214ENST00000482733 SERPINH1P50454 418 aaKnown RBP16.95■□□□□ 0.3
HMGN1-214ENST00000482733 ARF5P84085 180 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 DPYSQ14117 519 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 KRT81Q14533 505 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 TXNRD3NBQ6F5E7 133 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 LINGO4Q6UY18 593 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 LPCAT2Q7L5N7 544 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 POLNQ7Z5Q5 900 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 ZNF354CQ86Y25 554 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 MAP7D3Q8IWC1 876 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 TXLNBQ8N3L3 684 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 FAM160A2Q8N612 972 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-214ENST00000482733 CASKIN2Q8WXE0 1202 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 OR8D1Q8WZ84 308 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 DUSP15Q9H1R2 295 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-214ENST00000482733 MTG2Q9H4K7 406 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 NOL6Q9H6R4 1146 aaKnown RBP16.95■□□□□ 0.3
HMGN1-214ENST00000482733 PCDH18Q9HCL0 1135 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 NCDNQ9UBB6 729 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 CYP8B1Q9UNU6 501 aa16.95■□□□□ 0.3
HMGN1-214ENST00000482733 IGHV1OR15-9A0A0B4J2B8 117 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 ARHGAP42A6NI28 874 aa16.94■□□□□ 0.3
HMGN1-214ENST00000482733 TMEM110-MUSTN1A8MSY1 372 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms