RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 IFRD2Q12894 506 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 SLC9B1Q4ZJI4 515 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 FSTL4Q6MZW2 842 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 STRA8Q7Z7C7 330 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 PPP4R1Q8TF05 950 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 WNT8BQ93098 351 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 CCDC124Q96CT7 223 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 RBBP8Q99708 897 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 CPNE1Q99829 537 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 NAT9Q9BTE0 207 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.028e-7■■□□□ 13.8
ATG4B-220ENST00000482507 RNF208Q9H0X6 261 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 GDAP2Q9NXN4 497 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 UBQLN1Q9UMX0 589 aaKnown RBP15.19■□□□□ 0.02
ATG4B-220ENST00000482507 BPTFQ12830 3046 aa15.19■□□□□ 0.02
ATG4B-220ENST00000482507 MBLAC1A4D2B0 266 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 FESP07332 822 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 SPANXN3Q5MJ09 141 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 NOTUMQ6P988 496 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 CTU1Q7Z7A3 348 aaKnown RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 B3GALNT2Q8NCR0 500 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 APPL2Q8NEU8 664 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 MFSD3Q96ES6 412 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 TUBGCP5Q96RT8 1024 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 EBF3Q9H4W6 596 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 COG4Q9H9E3 785 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 CDH22Q9UJ99 828 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 ADAMTS6Q9UKP5 1117 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 EEF2KO00418 725 aaKnown RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 NRP1O14786 923 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 DCXO43602 365 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 RNASEH1O60930 286 aaKnown RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 FKBP6O75344 327 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 CD68P34810 354 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 ITGA7Q13683 1181 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 LRRC36Q1X8D7 754 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 CERCAMQ5T4B2 595 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 KIAA0319Q5VV43 1072 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 LPCAT4Q643R3 524 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 HPS6Q86YV9 775 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 PSTKQ8IV42 348 aaKnown RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 NPWQ8N729 165 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 ACTRT2Q8TDY3 377 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 TSC22D3Q99576 134 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 DUSP16Q9BY84 665 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 TRMT13Q9NUP7 481 aaKnown RBP15.18■□□□□ 0.02
ATG4B-220ENST00000482507 TXNDC16Q9P2K2 825 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
ATG4B-220ENST00000482507 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■■■■□ 20.8
ATG4B-220ENST00000482507 E9PBE3 544 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 KLHL41O60662 606 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 LTFP02788 710 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 HSPA8P11142 646 aaKnown RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 GNAT1P11488 350 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 ERCC2P18074 760 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 NOS2P35228 1153 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 LIMK2P53671 638 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 SFT2D3Q587I9 215 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 HSP90AA5PQ58FG0 334 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 DHDDSQ86SQ9 333 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 CLEC14AQ86T13 490 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 TMEM135Q86UB9 458 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 DEFB107AQ8IZN7 70 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 HIPK4Q8NE63 616 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 AGR3Q8TD06 166 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 HNRNPABQ99729 332 aaKnown RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 APOL2Q9BQE5 337 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 MLPHQ9BV36 600 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 KLHL8Q9P2G9 620 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 CACNG4Q9UBN1 327 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 TSC2P49815 1807 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 PPP1R12AO14974 1030 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 ZBTB24O43167 697 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 KPNA6O60684 536 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 AP2A1O95782 977 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 DARSP14868 501 aaKnown RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 MX2P20592 715 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 CCR10P46092 362 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 NKX3-2P78367 333 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 DEUP1Q05D60 604 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 MSLNQ13421 630 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 GSTA3Q16772 222 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 ANKRD20A4Q4UJ75 823 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 TCHHL1Q5QJ38 904 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 KCTD11Q693B1 232 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 AAGABQ6PD74 315 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 EPGNQ6UW88 154 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 ADGRG6Q86SQ4 1221 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 APLFQ8IW19 511 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 SLC26A7Q8TE54 656 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 SLC2A13Q96QE2 648 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 OR52B2Q96RD2 323 aa15.17■□□□□ 0.02
ATG4B-220ENST00000482507 NR1H4Q96RI1 486 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-220ENST00000482507 CDH19Q9H159 772 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms