RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	KLK6	Q92876	244 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	EEF2KMT	Q96G04	330 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	SERPINB11	Q96P15	392 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.9	□□□□□ -0.66
APTX-222	ENST00000478279	NCKIPSD	Q9NZQ3	722 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	SERTAD1	Q9UHV2	236 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	KIAA1257	Q9ULG3	409 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	TLR6	Q9Y2C9	796 aa		10.9	□□□□□ -0.66
APTX-222	ENST00000478279	TRPM6	Q9BX84	2022 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	CPED1	A4D0V7	1026 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	PIK3R2	O00459	728 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	RIOK3	O14730	519 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	MCF2L	O15068	1137 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	SUV39H1	O43463	412 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ATP9B	O43861	1147 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	TCEA3	O75764	348 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	TNFSF15	O95150	251 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	MOCS2	O96007	188 aa	Predicted RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	CENPB	P07199	599 aa	Predicted RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	PDGFRA	P16234	1089 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ZNF18	P17022	549 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	HNRNPA2B1	P22626	353 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	RPL13	P26373	211 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	PLK1	P53350	603 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	NUCB2	P80303	420 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ZNF177	Q13360	481 aa	Predicted RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ADAM9	Q13443	819 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	CUL2	Q13617	745 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	CDKN3	Q16667	212 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ZNF284	Q2VY69	593 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ZNF542P	Q5EBM4	170 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	PIP5KL1	Q5T9C9	394 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ERICH6B	Q5W0A0	696 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	RESP18	Q5W5W9	173 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	FOXR1	Q6PIV2	292 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	LCLAT1	Q6UWP7	414 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	EFL1	Q7Z2Z2	1120 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ABI3BP	Q7Z7G0	1075 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	HORMAD1	Q86X24	394 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	DCP2	Q8IU60	420 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	SLC22A18AS	Q8N1D0	253 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	FAM174A	Q8TBP5	190 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	CLEC4C	Q8WTT0	213 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ERCC4	Q92889	916 aa	Predicted RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ARRDC3	Q96B67	414 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	PAGE5	Q96GU1	130 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	NOX5	Q96PH1	765 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	UPF2	Q9HAU5	1272 aa	Known RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	FZD3	Q9NPG1	666 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	DNAJC28	Q9NX36	388 aa		10.89	□□□□□ -0.67
APTX-222	ENST00000478279	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.89	□□□□□ -0.67
APTX-222	ENST00000478279	PMS2P1	A4D2B8	440 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	EME2	A4GXA9	379 aa	Predicted RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	STX10	O60499	249 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	FBXO21	O94952	628 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	GJB6	O95452	261 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	AFP	P02771	609 aa	Known RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CSF2	P04141	144 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	FYN	P06241	537 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	ITGB6	P18564	788 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	TACR2	P21452	398 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	NUMB	P49757	651 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	INHBC	P55103	352 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	OXCT1	P55809	520 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CLDN2	P57739	230 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	YWHAE	P62258	255 aa	Known RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	NFKB2	Q00653	900 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CCDC15	Q0P6D6	951 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	DLG2	Q15700	870 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	ACCSL	Q4AC99	568 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	RAP1GAP2	Q684P5	730 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	GUSBP11	Q6P575	273 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	GCNT7	Q6ZNI0	430 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279		Q6ZSR6	202 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	USP53	Q70EK8	1073 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CHSY1	Q86X52	802 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CCAR2	Q8N163	923 aa	Known RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	SGF29	Q96ES7	293 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	INTS4	Q96HW7	963 aa	Known RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	HSFY1	Q96LI6	401 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	PPP1R9B	Q96SB3	815 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	SEMA3C	Q99985	751 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	ARHGAP9	Q9BRR9	750 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	XPO7	Q9UIA9	1087 aa	Known RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	SALL4	Q9UJQ4	1053 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	SLC25A13	Q9UJS0	675 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	PCDHA7	Q9UN72	937 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	HS3ST3A1	Q9Y663	406 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CSNK1G3	Q9Y6M4	447 aa		10.88	□□□□□ -0.67
APTX-222	ENST00000478279	UTP20	O75691	2785 aa	Known RBP	10.88	□□□□□ -0.67
APTX-222	ENST00000478279	CCDC187	A0A096LP49	1063 aa		10.87	□□□□□ -0.67
APTX-222	ENST00000478279		A6NNZ2	444 aa		10.87	□□□□□ -0.67
APTX-222	ENST00000478279		F5H5T6	163 aa		10.87	□□□□□ -0.67
APTX-222	ENST00000478279		H3BM21	787 aa		10.87	□□□□□ -0.67
APTX-222	ENST00000478279	ACTN4	O43707	911 aa	Known RBP	10.87	□□□□□ -0.67
APTX-222	ENST00000478279	APOE	P02649	317 aa		10.87	□□□□□ -0.67
APTX-222	ENST00000478279	ITGB2	P05107	769 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms