RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 FAM71DQ8N9W8 422 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PPTC7Q8NI37 304 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 UBA3Q8TBC4 463 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MZB1Q8WU39 189 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 DCAKDQ8WVC6 231 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 C10orf82Q8WW14 230 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MYO18AQ92614 2054 aaKnown RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF75CPQ92670 426 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 INPP5DQ92835 1189 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 FAF2Q96CS3 445 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 LRRC39Q96DD0 335 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CPB2Q96IY4 423 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CLMNQ96JQ2 1002 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF668Q96K58 619 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 RMDN2Q96LZ7 410 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM74Q96NL1 305 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PEBP4Q96S96 227 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF670Q9BS34 389 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TUBB6Q9BUF5 446 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 KLC2Q9H0B6 622 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MYLK2Q9H1R3 596 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 VPS11Q9H270 941 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TNKS2Q9H2K2 1166 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 RNPEPQ9H4A4 650 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 NSUN3Q9H649 340 aaKnown RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PLEKHA5Q9HAU0 1116 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PRDM16Q9HAZ2 1276 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SAR1AQ9NR31 198 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ARHGEF3Q9NR81 526 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PDGFCQ9NRA1 345 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SAE1Q9UBE0 346 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 HESX1Q9UBX0 185 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 HMGXB4Q9UGU5 601 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 GTF2IRD1Q9UHL9 959 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 BAIAP2L1Q9UHR4 511 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TSPAN16Q9UKR8 245 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CHMP2BQ9UQN3 213 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TEX264Q9Y6I9 313 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 IKBKGQ9Y6K9 419 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TPRP12270 2363 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TSC2P49815 1807 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM238LA0A1B0GVL6 79 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 A0A1W2PPM1 405 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TCRBV7S3A2A0A539 114 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 RRN3P2A6NIE6 340 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KBTBD13C9JR72 458 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TRDMT1O14717 391 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KCNN4O15554 427 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 LPXNO60711 386 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 BANF1O75531 89 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF189O75820 626 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ZBED1O96006 694 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 VTNP04004 478 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PFKMP08237 780 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KRT16P08779 473 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CELA3AP09093 270 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 DHRS4L1P0CG22 281 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SYN1P17600 705 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KRT4P19013 534 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TPSB2P20231 275 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CYP3A5P20815 502 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ITGB8P26012 769 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ELK3P41970 407 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PTPN9P43378 593 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 NEK3P51956 506 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PRMT2P55345 433 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 BCAR1P56945 870 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 YWHAGP61981 247 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KCNJ2P63252 427 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF200P98182 395 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 GAD2Q05329 585 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SLC18A2Q05940 514 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CRHR2Q13324 411 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SNAPC2Q13487 334 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 EFTUD2Q15029 972 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PCBP1Q15365 356 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TAF5Q15542 800 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TPSAB1Q15661 275 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KCNA10Q16322 511 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CDO1Q16878 200 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 C15orf59Q2T9L4 293 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC14Q49A88 953 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SLC45A4Q5BKX6 768 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 LGSNQ5TDP6 509 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SLC9A4Q6AI14 798 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TRNP1Q6NT89 227 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 OLFML1Q6UWY5 402 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 MAMDC4Q6UXC1 1216 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 NPNTQ6UXI9 565 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CYP4V2Q6ZWL3 525 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ARCQ7LC44 396 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 OTOAQ7RTW8 1153 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM110Q86TL2 294 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SLC26A11Q86WA9 606 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CEP57Q86XR8 500 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PLD5Q8N7P1 536 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 MCUQ8NE86 351 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 GPRC5AQ8NFJ5 357 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 BEST2Q8NFU1 509 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms