RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 USP1O94782 785 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 GNAZP19086 355 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 OR1G1P47890 313 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 KDSRQ06136 332 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 KYAT3Q6YP21 454 aaKnown RBP16.97■□□□□ 0.31
TVP23B-202ENST00000476139 C10orf107Q8IVU9 208 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 PPP1R14CQ8TAE6 165 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 WDR60Q8WVS4 1066 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 MCUR1Q96AQ8 359 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 CPNE1Q99829 537 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 EBF4Q9BQW3 602 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 BRD8Q9H0E9 1235 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 SAR1AQ9NR31 198 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 SNX15Q9NRS6 342 aa16.97■□□□□ 0.31
TVP23B-202ENST00000476139 BIRC5O15392 142 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 MTSS1O43312 755 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 CCR1P32246 355 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 MAPRE1Q15691 268 aaKnown RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 MBLAC2Q68D91 279 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 C14orf80Q86SX3 495 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 TRIM42Q8IWZ5 723 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 MIEF2Q96C03 454 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 C20orf96Q9NUD7 363 aaPredicted RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 DCDC2Q9UHG0 476 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 LAMA3Q16787 3333 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 TRAFD1O14545 582 aaPredicted RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 DNAJC6O75061 913 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 FGF3P11487 239 aaPredicted RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 ARRB2P32121 409 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 PTDSS1P48651 473 aaKnown RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 PCLAFQ15004 111 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 ITPRIPL1Q6GPH6 555 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 TREML1Q86YW5 311 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 CRLF3Q8IUI8 442 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 ACMSDQ8TDX5 336 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 LINC01599Q8WXQ3 324 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 B3GALT6Q96L58 329 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 RBBP8Q99708 897 aa16.96■□□□□ 0.31
TVP23B-202ENST00000476139 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.96■□□□□ 0.31
TVP23B-202ENST00000476139 MAFKO60675 156 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 GLRA3O75311 464 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 KRT36O76013 467 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 TUBP50607 506 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ALDH18A1P54886 795 aaKnown RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 GRTP1Q5TC63 336 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 GLB1LQ6UWU2 654 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 SCML4Q8N228 414 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 TTC9BQ8N6N2 239 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 UROC1Q96N76 676 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 RILPQ96NA2 401 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 VAT1Q99536 393 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 RGS18Q9NS28 235 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 IARS2Q9NSE4 1012 aaKnown RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 KCNK4Q9NYG8 393 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 RPLP2P05387 115 aaKnown RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 PDHA1P08559 390 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 PAX7P23759 505 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 NUMBP49757 651 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 IRF9Q00978 393 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 FAM26DQ5JW98 314 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 SPDYAQ5MJ70 313 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 MICAL1Q8TDZ2 1067 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 CLPTM1LQ96KA5 538 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 HAPLN3Q96S86 360 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ATXN3LQ9H3M9 355 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 THAP1Q9NVV9 213 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 LNPEPQ9UIQ6 1025 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 B2RBV5 119 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 SOAT2O75908 522 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 WFS1O76024 890 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 CST5P28325 142 aaPredicted RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ABL2P42684 1182 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 USP46P62068 366 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ACSBG2Q5FVE4 666 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 TRAF7Q6Q0C0 670 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 KCNMB4Q86W47 210 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ATPAF2Q8N5M1 289 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 MOCOSQ96EN8 888 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 NAF1Q96HR8 494 aaKnown RBP16.95■□□□□ 0.3
TVP23B-202ENST00000476139 SMOC2Q9H3U7 446 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 HS3ST4Q9Y661 456 aa16.95■□□□□ 0.3
TVP23B-202ENST00000476139 ERI2A8K979 691 aaKnown RBP16.94■□□□□ 0.3
TVP23B-202ENST00000476139 AOC2O75106 756 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 TBX18O95935 607 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 PROCP04070 461 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 TYMPP19971 482 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 POU6F1Q14863 301 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 RCN1Q15293 331 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 CCDC6Q16204 474 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 SLC24A5Q71RS6 500 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 ATAD1Q8NBU5 361 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 IPMKQ8NFU5 416 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 IL22Q9GZX6 179 aa16.94■□□□□ 0.3
TVP23B-202ENST00000476139 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.94■□□□□ 0.3
TVP23B-202ENST00000476139 PCDHB8Q9UN66 801 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms