RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 PDCD6IPQ8WUM4 868 aaKnown RBP16.64■□□□□ 0.25
TPR-205ENST00000474852 ATP6V1E2Q96A05 226 aa16.64■□□□□ 0.25
TPR-205ENST00000474852 EME1Q96AY2 570 aa16.64■□□□□ 0.25
TPR-205ENST00000474852 IARS2Q9NSE4 1012 aaKnown RBP16.64■□□□□ 0.25
TPR-205ENST00000474852 C20orf96Q9NUD7 363 aaPredicted RBP16.64■□□□□ 0.25
TPR-205ENST00000474852 UBP1Q9NZI7 540 aa16.64■□□□□ 0.25
TPR-205ENST00000474852 VANGL2Q9ULK5 521 aa16.64■□□□□ 0.25
TPR-205ENST00000474852 GINS2Q9Y248 185 aa16.64■□□□□ 0.25
TPR-205ENST00000474852 USP3Q9Y6I4 520 aa16.64■□□□□ 0.25
TPR-205ENST00000474852 TTC36A6NLP5 189 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 XPO1O14980 1071 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 RNASEH2AO75792 299 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 TFEBP19484 476 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 ME2P23368 584 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 PPARGP37231 505 aaPredicted RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 RPL14P50914 215 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 GALK1P51570 392 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 RPL26P61254 145 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 TMED1Q13445 227 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 PCDH20Q8N6Y1 951 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 CHST13Q8NET6 341 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 GRIN3AQ8TCU5 1115 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 ZFRQ96KR1 1074 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 NAT9Q9BTE0 207 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 KIAA1257Q9ULG3 409 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 DMTF1Q9Y222 760 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 C19orf81C9J6K1 198 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 STRNO43815 780 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 MCF2P10911 925 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 CDK4P11802 303 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 PTPN9P43378 593 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 SULT1E1P49888 294 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 NME3Q13232 169 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 ZNF460Q14592 562 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 TMEM259Q4ZIN3 620 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 SPANXN3Q5MJ09 141 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 IL23RQ5VWK5 629 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 AHI1Q8N157 1196 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 RP9Q8TA86 221 aaKnown RBP16.63■□□□□ 0.25
TPR-205ENST00000474852 PCDHAC1Q9H158 963 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 CHRAC1Q9NRG0 131 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 OXSMQ9NWU1 459 aa16.63■□□□□ 0.25
TPR-205ENST00000474852 NAB1Q13506 487 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 DCAF6Q58WW2 860 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 GJC2Q5T442 439 aaPredicted RBP16.62■□□□□ 0.25
TPR-205ENST00000474852 CCNYL1Q8N7R7 359 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 SNX31Q8N9S9 440 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 RNF139Q8WU17 664 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 TMIGD2Q96BF3 282 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 VPS39Q96JC1 886 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 ZNF512Q96ME7 567 aaPredicted RBP16.62■□□□□ 0.25
TPR-205ENST00000474852 LRRC40Q9H9A6 602 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 NUP205Q92621 2012 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 TMEM114B3SHH9 223 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 GRID2O43424 1007 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 VAPBO95292 243 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 MPP3Q13368 585 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 TICAM1Q8IUC6 712 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 DEFB106AQ8N104 65 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 ADCY4Q8NFM4 1077 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 NLRP7Q8WX94 980 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 C11orf84Q9BUA3 381 aaPredicted RBP16.62■□□□□ 0.25
TPR-205ENST00000474852 SUDS3Q9H7L9 328 aaPredicted RBP16.62■□□□□ 0.25
TPR-205ENST00000474852 ZNF696Q9H7X3 374 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 BLOC1S6Q9UL45 172 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 RAP2CQ9Y3L5 183 aa16.62■□□□□ 0.25
TPR-205ENST00000474852 HMGB2P26583 209 aaKnown RBP16.61■□□□□ 0.25
TPR-205ENST00000474852 MAGEA8P43361 318 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 GRM3Q14832 879 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 ZFP1Q6P2D0 407 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 SLC26A9Q7LBE3 791 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 KCNMB4Q86W47 210 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 PGAM4Q8N0Y7 254 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 KCTD4Q8WVF5 259 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 SNRNP27Q8WVK2 155 aaKnown RBP16.61■□□□□ 0.25
TPR-205ENST00000474852 SGF29Q96ES7 293 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 OMDQ99983 421 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 EIF2B3Q9NR50 452 aaKnown RBP16.61■□□□□ 0.25
TPR-205ENST00000474852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.61■□□□□ 0.253e-7■□□□□ 9
TPR-205ENST00000474852 BFARQ9NZS9 450 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 CDYLQ9Y232 598 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 CITO14578 2027 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 ZCWPW2A0A1B0GU75 182 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 HACD1B0YJ81 288 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 MAGEB3O15480 346 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 PSMC3P17980 439 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 MAGEA12P43365 314 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 NUMBP49757 651 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 PTK2BQ14289 1009 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
TPR-205ENST00000474852 FAM219BQ5XKK7 198 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 GK5Q6ZS86 529 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 CLEC14AQ86T13 490 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 ZNF410Q86VK4 478 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 TRIML2Q8N7C3 387 aa16.61■□□□□ 0.25
TPR-205ENST00000474852 CENPIQ92674 756 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms