RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SH2D3CQ8N5H7 860 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 DCAF4L2Q8NA75 395 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 SYN2Q92777 582 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-210ENST00000474568 FOXJ1Q92949 421 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 BTBD1Q9H0C5 482 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 ATP13A1Q9HD20 1204 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 FBXL12Q9NXK8 326 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 PCSK1NQ9UHG2 260 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 FZD10Q9ULW2 581 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITGB1-210ENST00000474568 ACTL7AQ9Y615 435 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 DMXL1Q9Y485 3027 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 CKAP5Q14008 2032 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 ILVBLA1L0T0 632 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 TMEM191CA6NGB0 347 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 PLK4O00444 970 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 SMAD6O43541 496 aaKnown RBP16.39■□□□□ 0.21
ITGB1-210ENST00000474568 ATP9BO43861 1147 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 RNASEH2AO75792 299 aaKnown RBP16.39■□□□□ 0.21
ITGB1-210ENST00000474568 RHOQP17081 205 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 SLC8A1P32418 973 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 MAPK8P45983 427 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 GNA12Q03113 381 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 ARID5BQ14865 1188 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 WDR45BQ5MNZ6 344 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 IL31Q6EBC2 164 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 LEKR1Q6ZMV7 388 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 VPS36Q86VN1 386 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 NLRP14Q86W24 1093 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
ITGB1-210ENST00000474568 IQCDQ96DY2 449 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 OMDQ99983 421 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 NUSAP1Q9BXS6 441 aaKnown RBP16.39■□□□□ 0.21
ITGB1-210ENST00000474568 TNKS2Q9H2K2 1166 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 NCKAP1Q9Y2A7 1128 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 BZW2Q9Y6E2 419 aaKnown RBP16.39■□□□□ 0.21
ITGB1-210ENST00000474568 CEP250Q9BV73 2442 aa16.39■□□□□ 0.21
ITGB1-210ENST00000474568 A0A087X0T9 212 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 C4orf47A7E2U8 309 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 SLC30A4O14863 429 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 FSBPO95073 299 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 SEMA4FO95754 770 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 FAM228BP0C875 321 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 EPHB2P29323 1055 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 NRG1Q02297 640 aaPredicted RBP16.38■□□□□ 0.21
ITGB1-210ENST00000474568 SCAPQ12770 1279 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
ITGB1-210ENST00000474568 DUOXA1Q1HG43 343 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 UAP1L1Q3KQV9 507 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 DAB2IPQ5VWQ8 1189 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 PEAR1Q5VY43 1037 aaPredicted RBP16.38■□□□□ 0.21
ITGB1-210ENST00000474568 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 ZNF354CQ86Y25 554 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 HDDC3Q8N4P3 179 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 ARFGAP1Q8N6T3 406 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 OR8D1Q8WZ84 308 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 TRIM11Q96F44 468 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 PEBP4Q96S96 227 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 RTKNQ9BST9 563 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 GTPBP2Q9BX10 602 aaKnown RBP16.38■□□□□ 0.21
ITGB1-210ENST00000474568 THAP2Q9H0W7 228 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 ISCUQ9H1K1 167 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 NEUROG2Q9H2A3 272 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 TMEM248Q9NWD8 314 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 ARHGAP20Q9P2F6 1191 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 EVLQ9UI08 416 aaPredicted RBP16.38■□□□□ 0.21
ITGB1-210ENST00000474568 EIF2B4Q9UI10 523 aaKnown RBP16.38■□□□□ 0.21
ITGB1-210ENST00000474568 SCINQ9Y6U3 715 aa16.38■□□□□ 0.21
ITGB1-210ENST00000474568 GON4LQ3T8J9 2241 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 RALGAPA1Q6GYQ0 2036 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 METTL12A8MUP2 240 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 MYBL1P10243 752 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 ENGP17813 658 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 SDHBP21912 280 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 L1CAMP32004 1257 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
ITGB1-210ENST00000474568 DPP6P42658 865 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 MAPKAPK2P49137 400 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 DNA2P51530 1060 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 CA9Q16790 459 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 C22orf39Q6P5X5 142 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 VSTM4Q8IW00 320 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 AADATQ8N5Z0 425 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 CADM4Q8NFZ8 388 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 OR2I1PQ8NGU4 316 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 BTBD6Q96KE9 485 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 EPAS1Q99814 870 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
ITGB1-210ENST00000474568 SGK2Q9HBY8 427 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 SARDHQ9UL12 918 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 SLC6A14Q9UN76 642 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 AP4E1Q9UPM8 1137 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 HS3ST2Q9Y278 367 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 FCF1Q9Y324 198 aaKnown RBP16.37■□□□□ 0.21
ITGB1-210ENST00000474568 SLCO1B1Q9Y6L6 691 aa16.37■□□□□ 0.21
ITGB1-210ENST00000474568 SPTBN4Q9H254 2564 aa16.36■□□□□ 0.21
ITGB1-210ENST00000474568 RAMP2O60895 175 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms