RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 A0A1W2PP55 124 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FAM72CH0Y354 149 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 MCF2LO15068 1137 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 SNAP91O60641 907 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FSBPO95073 299 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.57
CKS1B-206ENST00000474215 ADRB1P08588 477 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 SRCP12931 536 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 CSRP1P21291 193 aaKnown RBP11.46□□□□□ -0.57
CKS1B-206ENST00000474215 RRM1P23921 792 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 CD27P26842 260 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 PRKCIP41743 596 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 RPL7AP62424 266 aaKnown RBP11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FANCCQ00597 558 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 SEMA3BQ13214 749 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 ZSCAN23Q3MJ62 389 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FIGNQ5HY92 759 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 N4BP2L1Q5TBK1 243 aaPredicted RBP11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FAM72AQ5TYM5 149 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 MANEALQ5VSG8 457 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 KIAA0895LQ68EN5 471 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FAM72DQ6L9T8 149 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 RETSATQ6NUM9 610 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 RWDD4Q6NW29 188 aaKnown RBP11.46□□□□□ -0.57
CKS1B-206ENST00000474215 DCUN1D2Q6PH85 259 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 Q6ZVU0 165 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 SLFN11Q7Z7L1 901 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 FAM72BQ86X60 149 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 HDDC3Q8N4P3 179 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 AADATQ8N5Z0 425 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 CCDC185Q8N715 623 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 DCAF4L2Q8NA75 395 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 ATP11CQ8NB49 1132 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 OR8D1Q8WZ84 308 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 SNX19Q92543 992 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 NTAN1Q96AB6 310 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 CNPY3Q9BT09 278 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 SPON2Q9BUD6 331 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 MAGEB5Q9BZ81 275 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 TTYH3Q9C0H2 523 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 HAUS4Q9H6D7 363 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 PARVAQ9NVD7 372 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 TAS2R14Q9NYV8 317 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 PPM1HQ9ULR3 514 aa11.46□□□□□ -0.57
CKS1B-206ENST00000474215 CEP192Q8TEP8 1941 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 FAM47DPA6NHR8 397 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 LRRC72A6NJI9 287 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 UPK3BL1B0FP48 263 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 UPK3BL2E5RIL1 263 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 K7ERQ8 282 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 CBX4O00257 560 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 ALOX15BO15296 676 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 CCP110O43303 1012 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 SMAD6O43541 496 aaKnown RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 OPHN1O60890 802 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 IGHV4-34P06331 123 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 GZMAP12544 262 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 CEACAM1P13688 526 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 RHOQP17081 205 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 CSNK1EP49674 416 aaKnown RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 NOVA1P51513 510 aaKnown RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 CLCN6P51797 869 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 AFF3P51826 1226 aaKnown RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 UBASH3AP57075 661 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 GNA12Q03113 381 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 SLC20A2Q08357 652 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 SCAPQ12770 1279 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 GRIK2Q13002 908 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 SLC14A1Q13336 389 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 MAMLD1Q13495 774 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 FAM46CQ5VWP2 391 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 E4F1Q66K89 784 aaPredicted RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 PSAPL1Q6NUJ1 521 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 NCEH1Q6PIU2 408 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 LINGO4Q6UY18 593 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 ZNF571Q7Z3V5 609 aaPredicted RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 OR7D4Q8NG98 312 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 OR2I1PQ8NGU4 316 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 OR2T34Q8NGX1 318 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 OR14C36Q8NHC7 312 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 MCEEQ96PE7 176 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 DNAAF2Q9NVR5 837 aaKnown RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 SARDHQ9UL12 918 aa11.45□□□□□ -0.58
CKS1B-206ENST00000474215 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
CKS1B-206ENST00000474215 GON4LQ3T8J9 2241 aa11.44□□□□□ -0.58
CKS1B-206ENST00000474215 A0A1B0GVT2 93 aa11.44□□□□□ -0.58
CKS1B-206ENST00000474215 A0A1W2PQJ5 194 aa11.44□□□□□ -0.58
CKS1B-206ENST00000474215 C1QTNF3-AMACRE9PGA6 284 aa11.44□□□□□ -0.58
CKS1B-206ENST00000474215 DDX3XO00571 662 aaKnown RBP eCLIP11.44□□□□□ -0.58
CKS1B-206ENST00000474215 GIPC1O14908 333 aa11.44□□□□□ -0.58
CKS1B-206ENST00000474215 BNIP3LO60238 219 aa11.44□□□□□ -0.58
CKS1B-206ENST00000474215 ZMPSTE24O75844 475 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms