RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 C11orf57Q6ZUT1 292 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 Q6ZVU0 165 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D3Q8IZP1 549 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 SH2D3CQ8N5H7 860 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 C1orf131Q8NDD1 294 aaKnown RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-219ENST00000474042 COX16Q9P0S2 106 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 VANGL2Q9ULK5 521 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 PPM1HQ9ULR3 514 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 HS3ST2Q9Y278 367 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 TBC1D30Q9Y2I9 924 aa13.76□□□□□ -0.21
COPS7B-219ENST00000474042 PAGE1O75459 146 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 CLDN11O75508 207 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 PON1P27169 355 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 MAT2AP31153 395 aaKnown RBP13.75□□□□□ -0.21
COPS7B-219ENST00000474042 NOS2P35228 1153 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 HNF1BP35680 557 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 USP8P40818 1118 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 TAS2R38P59533 333 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 CNTN1Q12860 1018 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 BNIP3Q12983 259 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 DLG2Q15700 870 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 EXOC3L4Q17RC7 722 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 PIP5KL1Q5T9C9 394 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF683Q8IZ20 524 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 PIP4K2CQ8TBX8 421 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 RNF34Q969K3 372 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 NOX5Q96PH1 765 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 PSMB7Q99436 277 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 NPY6RQ99463 290 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 PREBQ9HCU5 417 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 VPS28Q9UK41 221 aa13.75□□□□□ -0.21
COPS7B-219ENST00000474042 SMG1Q96Q15 3661 aaKnown RBP13.75□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-219ENST00000474042 I6L893 689 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-219ENST00000474042 MAGEC1O60732 1142 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 CTSLP07711 333 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 SRCP12931 536 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 CDH4P55283 916 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 SLC6A3Q01959 620 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 NME3Q13232 169 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 ZNF177Q13360 481 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-219ENST00000474042 ILKQ13418 452 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 POM121L1PQ3SYA9 428 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 ACCSLQ4AC99 568 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 SETMARQ53H47 684 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-219ENST00000474042 HES3Q5TGS1 186 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 OR6B2Q6IFH4 312 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 TMEM145Q8NBT3 493 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 BBC3Q96PG8 261 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-219ENST00000474042 ANLNQ9NQW6 1124 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 ARHGEF38Q9NXL2 777 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 RRN3Q9NYV6 651 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 KIAA1468Q9P260 1216 aa13.74□□□□□ -0.21
COPS7B-219ENST00000474042 CHD5Q8TDI0 1954 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 PRAMEF26H0Y7S4 382 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 M0QYT0 321 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 ADCY5O95622 1261 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 PNMA6AP0CW24 399 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-219ENST00000474042 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-219ENST00000474042 CDH5P33151 784 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-219ENST00000474042 CXCR3P49682 368 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 PTK2Q05397 1052 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 RTP5Q14D33 572 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 PROX2Q3B8N5 592 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 ALFQ53S48 1182 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 BRMS1LQ5PSV4 323 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 ARTNQ5T4W7 220 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 C6orf118Q5T5N4 469 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 SLC47A2Q86VL8 602 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 ZDHHC17Q8IUH5 632 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 DCAF4L2Q8NA75 395 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 RFFLQ8WZ73 363 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 NT5C3BQ969T7 300 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
COPS7B-219ENST00000474042 CRELD1Q96HD1 420 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 VPS51Q9UID3 782 aa13.73□□□□□ -0.21
COPS7B-219ENST00000474042 IGLV3-10A0A075B6K4 115 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 TLX3O43711 291 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-219ENST00000474042 SNAP91O60641 907 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 RNGTTO60942 597 aaKnown RBP13.72□□□□□ -0.21
COPS7B-219ENST00000474042 CNTN5O94779 1100 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 MT-CO1P00395 513 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 RHOCP08134 193 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 JUPP14923 745 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 CKMT2P17540 419 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 ACP1P24666 158 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 CLCN1P35523 988 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 SCNN1AP37088 669 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 ABCG1P45844 678 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 CLCN6P51797 869 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 SNX16P57768 344 aa13.72□□□□□ -0.21
COPS7B-219ENST00000474042 KRT83P78385 493 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms