RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CETN3O15182 167 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 RNGTTO60942 597 aaKnown RBP9.89□□□□□ -0.83
MCF2L-223ENST00000473345 USP12O75317 370 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 ZNF821O75541 412 aaPredicted RBP9.89□□□□□ -0.83
MCF2L-223ENST00000473345 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
MCF2L-223ENST00000473345 ZNF202O95125 648 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 TRUB2O95900 331 aaKnown RBP9.89□□□□□ -0.83
MCF2L-223ENST00000473345 THEGLP0DJG4 465 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 CDK4P11802 303 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 CKMT1AP12532 417 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 PDX1P52945 283 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 KCNMA1Q12791 1236 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 DLG2Q15700 870 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 ATL3Q6DD88 541 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 OR6B2Q6IFH4 312 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 CRTC1Q6UUV9 634 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 PRPF39Q86UA1 669 aaKnown RBP9.89□□□□□ -0.83
MCF2L-223ENST00000473345 IQCHQ86VS3 1027 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 ZNF683Q8IZ20 524 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 FAM181AQ8N9Y4 354 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 FAM149B1Q96BN6 582 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 VCPIP1Q96JH7 1222 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 HSFY1Q96LI6 401 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 SERPINB11Q96P15 392 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 SPAG5Q96R06 1193 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 FEM1AQ9BSK4 669 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 RTN4Q9NQC3 1192 aaKnown RBP9.89□□□□□ -0.83
MCF2L-223ENST00000473345 TMPRSS4Q9NRS4 437 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 KLHL11Q9NVR0 708 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 CFAP45Q9UL16 551 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 CEP83Q9Y592 693 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 ACTL7AQ9Y615 435 aa9.89□□□□□ -0.83
MCF2L-223ENST00000473345 POM121BA6NF01 834 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 PRAMEF26H0Y7S4 382 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 K7ESM1 405 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 MCF2LO15068 1137 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SLC16A3O15427 465 aaKnown RBP9.88□□□□□ -0.83
MCF2L-223ENST00000473345 KLK10O43240 276 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SPINT1O43278 529 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 BNIP3LO60238 219 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 CNTN5O94779 1100 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 FBXO21O94952 628 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SRCP12931 536 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 BMP6P22004 513 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 PCBP4P57723 403 aaKnown RBP9.88□□□□□ -0.83
MCF2L-223ENST00000473345 FZD2Q14332 565 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 STAT4Q14765 748 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 TMEM259Q4ZIN3 620 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 ALFQ53S48 1182 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 TAF1BQ53T94 588 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-223ENST00000473345 PERM1Q5SV97 790 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 GUSBP11Q6P575 273 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 GJB7Q6PEY0 223 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 PPM1KQ8N3J5 372 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 EXD3Q8N9H8 876 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 ZNF248Q8NDW4 579 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 OR2A12Q8NGT7 310 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SNRNP27Q8WVK2 155 aaKnown RBP9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SKA1Q96BD8 255 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 KLHDC7BQ96G42 594 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 ATXN7L3BQ96GX2 97 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SPATA32Q96LK8 384 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 TCEAL2Q9H3H9 227 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-223ENST00000473345 CHMP5Q9NZZ3 219 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 KIAA1257Q9ULG3 409 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SATB2Q9UPW6 733 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 CNTN6Q9UQ52 1028 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 DMTF1Q9Y222 760 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 ENTPD2Q9Y5L3 495 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 HS3ST4Q9Y661 456 aa9.88□□□□□ -0.83
MCF2L-223ENST00000473345 SYNJ2BP-COX16A0A087WUM0 186 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 A0A0D9SEW6 157 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 FAM170AA1A519 330 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 BECN2A8MW95 431 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 SLC7A4O43246 635 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 LZTS3O60299 673 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-223ENST00000473345 GRAP2O75791 330 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 HSP90AA1P07900 732 aaKnown RBP9.87□□□□□ -0.83
MCF2L-223ENST00000473345 RRM1P23921 792 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 LSSP48449 732 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-223ENST00000473345 DAB2P98082 770 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 NFKB2Q00653 900 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 AUHQ13825 339 aaKnown RBP9.87□□□□□ -0.83
MCF2L-223ENST00000473345 ISXQ2M1V0 245 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 ACCSLQ4AC99 568 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 C3orf38Q5JPI3 329 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 RNF219Q5W0B1 726 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-223ENST00000473345 ISM2Q6H9L7 571 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 LINGO4Q6UY18 593 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 ABI3BPQ7Z7G0 1075 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 TMEM110Q86TL2 294 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 DEFB106AQ8N104 65 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 OXR1Q8N573 874 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 KCNE4Q8WWG9 221 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 OR8D1Q8WZ84 308 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 BTN2A3PQ96KV6 586 aa9.87□□□□□ -0.83
MCF2L-223ENST00000473345 ZNF578Q96N58 590 aaPredicted RBP9.87□□□□□ -0.83
MCF2L-223ENST00000473345 CALN1Q9BXU9 219 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms