RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 KCNK9Q9NPC2 374 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 CHST12Q9NRB3 414 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 TMEM184CQ9NVA4 438 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 IGSF9Q9P2J2 1179 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 NFU1Q9UMS0 254 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 PCDHB7Q9Y5E2 793 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 USP16Q9Y5T5 823 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 CASZ1Q86V15 1759 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 ZMYM2Q9UBW7 1377 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 ARFGEF2Q9Y6D5 1785 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 AFDNP55196 1824 aaKnown RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 GOLGA6L3A6NEY3 463 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 M0QZQ0 153 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 ADAM10O14672 748 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 PCDH17O14917 1159 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 FFAR2O15552 330 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 CNOT3O75175 753 aaKnown RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 SGPL1O95470 568 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 TMEM191BP0C7N4 346 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 SETSIPP0DME0 302 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 HOXA7P31268 230 aaPredicted RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 STAT6P42226 847 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 NR4A2P43354 598 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 CPA2P48052 419 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 GRM4Q14833 912 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 RBMS2Q15434 407 aaKnown RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 SYCP2LQ5T4T6 812 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 C20orf194Q5TEA3 1177 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 XRRA1Q6P2D8 792 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF790Q6PG37 636 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 C16orf89Q6UX73 402 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 GATAD2AQ86YP4 633 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 SRFBP1Q8NEF9 429 aaKnown RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 NPIPB3Q92617 1050 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 KAT2BQ92831 832 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 TRMT61AQ96FX7 289 aaKnown RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 PRPF18Q99633 342 aaKnown RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 ELOVL1Q9BW60 279 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 ERVK-5Q9HDB9 667 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 MAGED2Q9UNF1 606 aaPredicted RBP4.61□□□□□ -1.67
COL9A1-206ENST00000470652 LRCH1Q9Y2L9 728 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 AFG3L2Q9Y4W6 797 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 HEG1Q9ULI3 1381 aa4.61□□□□□ -1.67
COL9A1-206ENST00000470652 SLC22A23A1A5C7 686 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 C2CD4BA6NLJ0 364 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 ERVV-2B6SEH9 535 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 SOCS2O14508 198 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 BMP15O95972 392 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 MYL6BP14649 208 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 ST6GAL1P15907 406 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 TFEBP19484 476 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 HTR3AP46098 478 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 DMWDQ09019 674 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 SPARCL1Q14515 664 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 TWIST1Q15672 202 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 RINT1Q6NUQ1 792 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 WDR93Q6P2C0 686 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 TOGARAM2Q6ZUX3 1019 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 FAM57BQ71RH2 274 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 NOL8Q76FK4 1167 aaKnown RBP4.6□□□□□ -1.67
COL9A1-206ENST00000470652 TRABD2AQ86V40 505 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 RFX6Q8HWS3 928 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF527Q8NB42 609 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 RSC1A1Q92681 617 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF48Q96MX3 618 aaPredicted RBP4.6□□□□□ -1.67
COL9A1-206ENST00000470652 PNNQ9H307 717 aaKnown RBP4.6□□□□□ -1.67
COL9A1-206ENST00000470652 PRDM16Q9HAZ2 1276 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 MLXIPLQ9NP71 852 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 CDC23Q9UJX2 597 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 B3GNT3Q9Y2A9 372 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 ZBTB1Q9Y2K1 713 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 EMSYQ7Z589 1322 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 BCORQ6W2J9 1755 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 NUP98P52948 1817 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 TAF1P21675 1872 aa4.6□□□□□ -1.67
COL9A1-206ENST00000470652 SRCAPQ6ZRS2 3230 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 HTATSF1O43719 755 aaKnown RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 CER1O95813 267 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 COL4A1P02462 1669 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 HSP90AB1P08238 724 aaKnown RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 PRF1P14222 555 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 AKR1A1P14550 325 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 SOX2P48431 317 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 SRSF1Q07955 248 aaKnown RBP eCLIP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 LMOD3Q0VAK6 560 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 IL16Q14005 1332 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 AAK1Q2M2I8 961 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 TWISTNBQ3B726 338 aaPredicted RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 ANXA2RQ3ZCQ2 193 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 PGBD2Q6P3X8 592 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 DHRS13Q6UX07 377 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 Q8N9P0 234 aaPredicted RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 ADPRHL1Q8NDY3 354 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 MPLKIPQ8TAP9 179 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 FAM71BQ8TC56 605 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 CICQ96RK0 1608 aaPredicted RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 TRMOQ9BU70 441 aa4.59□□□□□ -1.67
COL9A1-206ENST00000470652 TUBB6Q9BUF5 446 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms