RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ASB1Q9Y576 335 aa4.3□□□□□ -1.72
TMEM39A-204ENST00000468545 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
TMEM39A-204ENST00000468545 NME7Q9Y5B8 376 aa4.3□□□□□ -1.72
TMEM39A-204ENST00000468545 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
TMEM39A-204ENST00000468545 BZW2Q9Y6E2 419 aaKnown RBP4.3□□□□□ -1.72
TMEM39A-204ENST00000468545 TRIP11Q15643 1979 aa4.3□□□□□ -1.72
TMEM39A-204ENST00000468545 CITO14578 2027 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ANK1P16157 1881 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 A0A087X0T9 212 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 A0A0U1RQJ8 604 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ARHGEF37A1IGU5 675 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 MYBPHLA2RUH7 354 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 LCHNA4D1U4 455 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 NPIPB6E9PJ23 425 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 H7C4K7 107 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 M0QYV0 167 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 M0QZQ0 153 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CLDN5O00501 218 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 DDX3XO00571 662 aaKnown RBP eCLIP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 NEMP1O14524 444 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ARHGAP6O43182 974 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 MED7O43513 233 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TACC1O75410 805 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 NDUFA10O95299 355 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CXCL14O95715 111 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 FTLP02792 175 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PAEPP09466 180 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 FAM228BP0C875 321 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 LAG3P18627 525 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TYMPP19971 482 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 POU3F3P20264 500 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ABCB4P21439 1286 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 WARSP23381 471 aaKnown RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 HNRNPH3P31942 346 aaKnown RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CTNNB1P35222 781 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 THBS2P35442 1172 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PRKCIP41743 596 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 LHX1P48742 406 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 RGS7P49802 495 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 KRT83P78385 493 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CDK17Q00537 523 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 NFKB2Q00653 900 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TSPY1Q01534 308 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 FMO1Q01740 532 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PFKPQ01813 784 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CDR2Q01850 454 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 KRT17Q04695 432 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 YWHAHQ04917 246 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 MEA1Q16626 185 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PTPROQ16827 1216 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CCDC142Q17RM4 750 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 SKIDA1Q1XH10 827 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 GOLGA7BQ2TAP0 167 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC39A12Q504Y0 691 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 C2CD6Q53TS8 623 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 NAA35Q5VZE5 725 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 FAM109BQ6ICB4 259 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ALKBH5Q6P6C2 394 aaKnown RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PRSS55Q6UWB4 352 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 UNC93AQ86WB7 457 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEM173Q86WV6 379 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ERICH1Q86X53 443 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEM139Q8IV31 216 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 FMNL3Q8IVF7 1028 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CCDC170Q8IYT3 715 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TMEM86AQ8N2M4 240 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TTC39CQ8N584 583 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 HIPK4Q8NE63 616 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PHOSPHO2Q8TCD6 241 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 SLC2A14Q8TDB8 520 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 KBTBD7Q8WVZ9 684 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 AUTS2Q8WXX7 1259 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 RIN2Q8WYP3 895 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 IGSF21Q96ID5 467 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TNIP3Q96KP6 325 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ZSWIM3Q96MP5 696 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ELF4Q99607 663 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 SYT3Q9BQG1 590 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 SYT15Q9BQS2 421 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ZSWIM1Q9BR11 485 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 C17orf80Q9BSJ5 609 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TTPALQ9BTX7 342 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 PACSIN1Q9BY11 444 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 B3GNT5Q9BYG0 378 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 BRINP2Q9C0B6 783 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 ALG13Q9NP73 1137 aaKnown RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 EMC7Q9NPA0 242 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 LZTFL1Q9NQ48 299 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 MARCH5Q9NX47 278 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 TAS2R14Q9NYV8 317 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 SPG21Q9NZD8 308 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 HESX1Q9UBX0 185 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 CHORDC1Q9UHD1 332 aaPredicted RBP4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 MCM8Q9UJA3 840 aa4.29□□□□□ -1.72
TMEM39A-204ENST00000468545 GTF3C4Q9UKN8 822 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms