RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 LTFP02788 710 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 KRT16P08779 473 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 GLULP15104 373 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 MAN1A1P33908 653 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 MARCKSL1P49006 195 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 DLG4P78352 724 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 DEUP1Q05D60 604 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 ITKQ08881 620 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 MTA1Q13330 715 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 TMED1Q13445 227 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-205ENST00000468371 RCN1Q15293 331 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 TEAD4Q15561 434 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 MPPE1Q53F39 396 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 C1orf146Q5VVC0 180 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 ALKAL1Q6UXT8 129 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 ZNF662Q6ZS27 426 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 CYP2U1Q7Z449 544 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 SLC13A5Q86YT5 568 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-205ENST00000468371 SLC46A2Q9BY10 475 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 S1PR5Q9H228 398 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 DPEP3Q9H4B8 488 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 ZWILCHQ9H900 591 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 ZNF334Q9HCZ1 680 aaPredicted RBP6.14□□□□□ -1.43
SHQ1-205ENST00000468371 ACP6Q9NPH0 428 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 VPS28Q9UK41 221 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 INVSQ9Y283 1065 aa6.14□□□□□ -1.43
SHQ1-205ENST00000468371 MYH10P35580 1976 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 LOC730098B7Z3J9 87 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 RIPK2O43353 540 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 GRAP2O75791 330 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 RASSF9O75901 435 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PIAS1O75925 651 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 KAT7O95251 611 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 KLF8O95600 359 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 STAMBPO95630 424 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 EDN1P05305 212 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PAEPP09466 180 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 TNFRSF8P28908 595 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CORO1AP31146 461 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 FNTAP49354 379 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 TMPRSS15P98073 1019 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 TNK2Q07912 1038 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PRR23CQ6ZRP0 262 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CENPUQ71F23 418 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 TRMT10CQ7L0Y3 403 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 BZW1Q7L1Q6 419 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 OSTM1Q86WC4 334 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SCAMP5Q8TAC9 235 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ZNF707Q96C28 371 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CFAP36Q96G28 342 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CALN1Q9BXU9 219 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 B3GNT5Q9BYG0 378 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SLC13A1Q9BZW2 595 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 VCX3AQ9NNX9 186 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PAPOLBQ9NRJ5 636 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 COMMD8Q9NX08 183 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ADAM22Q9P0K1 906 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PHTF1Q9UMS5 762 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 H7C0C1 242 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SNX3O60493 162 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 FOXD2O60548 495 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PPFIA2O75334 1257 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 RPP40O75818 363 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 F9P00740 461 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ENO1P06733 434 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 GSTA1P08263 222 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PYGMP11217 842 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 EPHB2P29323 1055 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 HNRNPH3P31942 346 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CCR1P32246 355 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CTHP32929 405 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 PGM1P36871 562 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 GRIA2P42262 883 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ATP5OP48047 213 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SULT1E1P49888 294 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ARSEP51690 589 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 C21orf59P57076 290 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 TMCO4Q5TGY1 634 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SPATA24Q86W54 205 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 KIAA2013Q8IYS2 634 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ZSWIM2Q8NEG5 633 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 CEP295NLQ96MC4 621 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 HNRNPABQ99729 332 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 VN1R3Q9BXE9 311 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SLC32A1Q9H598 525 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 WDCPQ9H6R7 721 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 FNDC3AQ9Y2H6 1198 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 E2F8A0AVK6 867 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 MDM4O15151 490 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 NCF2P19878 526 aaPredicted RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 SAT1P21673 171 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 YWHAZP63104 245 aaKnown RBP6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ZBTB6Q15916 424 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 XKR4Q5GH76 650 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 WDR45BQ5MNZ6 344 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 LVRNQ6Q4G3 990 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 ISLR2Q6UXK2 745 aa6.13□□□□□ -1.43
SHQ1-205ENST00000468371 LRRTM3Q86VH5 581 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms