RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 EID2Q8N6I1 236 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 PIP4K2CQ8TBX8 421 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 SAP25Q8TEE9 199 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 MUC3BQ9H195 1237 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 PIGVQ9NUD9 493 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 OR51B4Q9Y5P0 310 aa21.64■■□□□ 1.05
COL9A3-207ENST00000467819 C1QTNF3-AMACRE9PGA6 284 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 YKT6O15498 198 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 SLC7A4O43246 635 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 PLRG1O43660 514 aaKnown RBP21.63■■□□□ 1.05
COL9A3-207ENST00000467819 CNTN5O94779 1100 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 ADCY5O95622 1261 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 TFE3P19532 575 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-207ENST00000467819 EPHA8P29322 1005 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-207ENST00000467819 ARRB1P49407 418 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-207ENST00000467819 SULT1E1P49888 294 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 VASPP50552 380 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-207ENST00000467819 BNIP3Q12983 259 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 DNAJC3Q13217 504 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 MAN2A1Q16706 1144 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 AGBL4Q5VU57 503 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 ZNF397Q8NF99 534 aaPredicted RBP21.63■■□□□ 1.05
COL9A3-207ENST00000467819 FAM131CQ96AQ9 280 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 TKTL2Q9H0I9 626 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 PDCL3Q9H2J4 239 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 KDM4CQ9H3R0 1056 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 ARHGAP20Q9P2F6 1191 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 SNX10Q9Y5X0 201 aa21.63■■□□□ 1.05
COL9A3-207ENST00000467819 ALOX15BO15296 676 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 RHOCP08134 193 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 CDH4P55283 916 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 CLDN6P56747 220 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 CAMK2BQ13554 666 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 COL9A2Q14055 689 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-207ENST00000467819 ALFQ53S48 1182 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 SPATS2Q86XZ4 545 aaKnown RBP21.62■■□□□ 1.05
COL9A3-207ENST00000467819 MFSD2AQ8NA29 543 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 MLKLQ8NB16 471 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 HNRNPLLQ8WVV9 542 aaKnown RBP21.62■■□□□ 1.05
COL9A3-207ENST00000467819 NPY6RQ99463 290 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 WDCPQ9H6R7 721 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 ANLNQ9NQW6 1124 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.62■■□□□ 1.05
COL9A3-207ENST00000467819 PPM1HQ9ULR3 514 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 TBC1D30Q9Y2I9 924 aa21.62■■□□□ 1.05
COL9A3-207ENST00000467819 IGSF10Q6WRI0 2623 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 MCF2LO15068 1137 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 SNAP91O60641 907 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 MT-CO1P00395 513 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 SRCP12931 536 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 PRKCSHP14314 528 aaPredicted RBP21.61■■□□□ 1.05
COL9A3-207ENST00000467819 RAPGEF1Q13905 1077 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 C5orf22Q49AR2 442 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 HSP90AA4PQ58FG1 418 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 BRMS1LQ5PSV4 323 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 ZDHHC17Q8IUH5 632 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 FAM71AQ8IYT1 594 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 OXR1Q8N573 874 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 PDCD7Q8N8D1 485 aaKnown RBP21.61■■□□□ 1.05
COL9A3-207ENST00000467819 ARHGEF38Q9NXL2 777 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 RRN3Q9NYV6 651 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 DKK4Q9UBT3 224 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 STAP1Q9ULZ2 295 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 CA5BQ9Y2D0 317 aa21.61■■□□□ 1.05
COL9A3-207ENST00000467819 I6L893 689 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-207ENST00000467819 RFPL3O75679 317 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 CXCR3P49682 368 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 BPIFB4P59827 614 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 KRT83P78385 493 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 DEUP1Q05D60 604 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 STAT4Q14765 748 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 FAM102AQ5T9C2 384 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-207ENST00000467819 PDZD3Q86UT5 571 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 TMPRSS12Q86WS5 348 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 TRIM69Q86WT6 500 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 FAM114A1Q8IWE2 563 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 ATP11CQ8NB49 1132 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 TMEM35BQ8NCS4 154 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 TBCBQ99426 244 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 PSMB7Q99436 277 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 MYOCQ99972 504 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 NDST4Q9H3R1 872 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 ERVMER34-1Q9H9K5 563 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 TMPRSS4Q9NRS4 437 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 VPS51Q9UID3 782 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 DMTF1Q9Y222 760 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 HS3ST2Q9Y278 367 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 FARP1Q9Y4F1 1045 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-207ENST00000467819 PCDHGA1Q9Y5H4 931 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 FASNP49327 2511 aaKnown RBP21.6■■□□□ 1.05
COL9A3-207ENST00000467819 TRPM6Q9BX84 2022 aa21.6■■□□□ 1.05
COL9A3-207ENST00000467819 K7ERQ8 282 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 PES1O00541 588 aaKnown RBP21.59■■□□□ 1.05
COL9A3-207ENST00000467819 CTSLP07711 333 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 RRM1P23921 792 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 NUDT1P36639 197 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 RXRGP48443 463 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 ACADVLP49748 655 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 TAS2R38P59533 333 aa21.59■■□□□ 1.05
COL9A3-207ENST00000467819 DRAP1Q14919 205 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms