RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CAPN11Q9UMQ6 739 aa4.1□□□□□ -1.75
XRN1-206ENST00000467077 GAB2Q9UQC2 676 aa4.1□□□□□ -1.75
XRN1-206ENST00000467077 TNFSF13BQ9Y275 285 aa4.1□□□□□ -1.75
XRN1-206ENST00000467077 PREX1Q8TCU6 1659 aa4.1□□□□□ -1.75
XRN1-206ENST00000467077 STRCQ7RTU9 1775 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 CXorf65A6NEN9 183 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 PPP6R2O75170 966 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 NEURL1O76050 574 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 CNTN5O94779 1100 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 NUDT6P53370 316 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 SNTA1Q13424 505 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 PLEKHO1Q53GL0 409 aaPredicted RBP4.09□□□□□ -1.75
XRN1-206ENST00000467077 TMEM196Q5HYL7 178 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 CLASRPQ8N2M8 674 aaKnown RBP4.09□□□□□ -1.75
XRN1-206ENST00000467077 SDR16C5Q8N3Y7 309 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 IL17FQ96PD4 163 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 WDR24Q96S15 920 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 CORO2BQ9UQ03 480 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 B3GNT3Q9Y2A9 372 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 SNX13Q9Y5W8 968 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 ABCA8O94911 1581 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 FRMPD1Q5SYB0 1578 aa4.09□□□□□ -1.75
XRN1-206ENST00000467077 ABCA9Q8IUA7 1624 aa4.09□□□□□ -1.76
XRN1-206ENST00000467077 RICTORQ6R327 1708 aa4.09□□□□□ -1.76
XRN1-206ENST00000467077 IGKV3D-15A0A087WSY6 115 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 SAA2-SAA4A0A096LPE2 208 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 LINC01553A4QN01 128 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 RHPN2P1A8MT19 583 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 EDIL3O43854 480 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 CCNT2O60583 730 aaKnown RBP4.08□□□□□ -1.76
XRN1-206ENST00000467077 PQBP1O60828 265 aaKnown RBP4.08□□□□□ -1.76
XRN1-206ENST00000467077 BAG4O95429 457 aaKnown RBP4.08□□□□□ -1.76
XRN1-206ENST00000467077 PARNO95453 639 aaKnown RBP4.08□□□□□ -1.76
XRN1-206ENST00000467077 ANXA2P07355 339 aaKnown RBP4.08□□□□□ -1.76
XRN1-206ENST00000467077 ZNF883P0CG24 379 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 GSTM5P46439 218 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 ST3GAL1Q11201 340 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 ILF3Q12906 894 aaKnown RBP eCLIP4.08□□□□□ -1.76
XRN1-206ENST00000467077 DUSP6Q16828 381 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 RETSATQ6NUM9 610 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 NAGSQ8N159 534 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 SRFBP1Q8NEF9 429 aaKnown RBP4.08□□□□□ -1.76
XRN1-206ENST00000467077 BICD2Q8TD16 824 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 SIGLEC1Q9BZZ2 1709 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 PNPLA8Q9NP80 782 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 TBC1D23Q9NUY8 699 aa4.08□□□□□ -1.76
XRN1-206ENST00000467077 GOLGA3Q08378 1498 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 RAPGEF2Q9Y4G8 1499 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 IGKV6D-41A0A0C4DH26 115 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 CBFA2T3O75081 653 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 HMGB1P09429 215 aaKnown RBP4.07□□□□□ -1.76
XRN1-206ENST00000467077 ALADP13716 330 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 SLC16A2P36021 539 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 PHEXP78562 749 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 TRAF3Q13114 568 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 DAG1Q14118 895 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 KRTAP13-3Q3SY46 172 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 C10orf76Q5T2E6 689 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 CCDC144NLQ6NUI1 221 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 RNF44Q7L0R7 432 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 ZNF771Q7L3S4 317 aaPredicted RBP4.07□□□□□ -1.76
XRN1-206ENST00000467077 TRMT1LQ7Z2T5 733 aaKnown RBP4.07□□□□□ -1.76
XRN1-206ENST00000467077 SMIM29Q86T20 159 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 ADPRHL1Q8NDY3 354 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 SPATA20Q8TB22 786 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 B3GNT4Q9C0J1 378 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 IL25Q9H293 177 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 AS3MTQ9HBK9 375 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 CHPF2Q9P2E5 772 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 IL36RNQ9UBH0 155 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 SLC4A4Q9Y6R1 1079 aa4.07□□□□□ -1.76
XRN1-206ENST00000467077 TTC37Q6PGP7 1564 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 CFAP74Q9C0B2 1584 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 ARHGEF40Q8TER5 1519 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 SERPINI2O75830 405 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 CFC1P0CG37 223 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 PIK3CBP42338 1070 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 ZNF543Q08ER8 600 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 ARL16Q0P5N6 197 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 HNF4GQ14541 408 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 EFHC1Q5JVL4 640 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 KRT28Q7Z3Y7 464 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 IQCDQ96DY2 449 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 C8orf48Q96LL4 319 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 HEYLQ9NQ87 328 aaPredicted RBP4.06□□□□□ -1.76
XRN1-206ENST00000467077 TMEM248Q9NWD8 314 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 MALT1Q9UDY8 824 aa4.06□□□□□ -1.76
XRN1-206ENST00000467077 SUPT6HQ7KZ85 1726 aaKnown RBP4.06□□□□□ -1.76
XRN1-206ENST00000467077 FANCAO15360 1455 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 NEO1Q92859 1461 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 POGZQ7Z3K3 1410 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 CLGNO14967 610 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 KIF3BO15066 747 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 KPNA5O15131 536 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 THAP12O43422 761 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 SLC5A1P13866 664 aa4.05□□□□□ -1.76
XRN1-206ENST00000467077 SLC37A1P57057 533 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms