RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RRN3Q9NYV6 651 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 M0QYT0 321 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 DAB1O75553 588 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 RFPL3O75679 317 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 ERBB2P04626 1255 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 ZNF18P17022 549 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 IRAK1P51617 712 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 CDH4P55283 916 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 CNTN1Q12860 1018 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 AGBL4Q5VU57 503 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 IRF2BP1Q8IU81 584 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 SH2D3CQ8N5H7 860 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 PIP4K2CQ8TBX8 421 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 SIK2Q9H0K1 926 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.34
USP42-205ENST00000465073 FASNP49327 2511 aaKnown RBP23.38■■□□□ 1.33
USP42-205ENST00000465073 CBX4O00257 560 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 JUPP14923 745 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 MAT2AP31153 395 aaKnown RBP23.38■■□□□ 1.33
USP42-205ENST00000465073 HNF1BP35680 557 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 DNAJC3Q13217 504 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 STAT4Q14765 748 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 Q6ZVU0 165 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 C14orf80Q86SX3 495 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 SPATS2Q86XZ4 545 aaKnown RBP23.38■■□□□ 1.33
USP42-205ENST00000465073 ZDHHC17Q8IUH5 632 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 TSC1Q92574 1164 aa23.38■■□□□ 1.33
USP42-205ENST00000465073 FARP1Q9Y4F1 1045 aaPredicted RBP23.38■■□□□ 1.33
USP42-205ENST00000465073 FOXN3O00409 490 aaPredicted RBP23.37■■□□□ 1.33
USP42-205ENST00000465073 MTIF2P46199 727 aaKnown RBP23.37■■□□□ 1.33
USP42-205ENST00000465073 ACADVLP49748 655 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 KRT83P78385 493 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 BNIP3Q12983 259 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 ACAP1Q15027 740 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 PTPN20Q4JDL3 420 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 SETMARQ53H47 684 aaPredicted RBP23.37■■□□□ 1.33
USP42-205ENST00000465073 BRMS1LQ5PSV4 323 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 SFMBT2Q5VUG0 894 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 NPY6RQ99463 290 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 MUC3BQ9H195 1237 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 WDCPQ9H6R7 721 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 PREBQ9HCU5 417 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 SIX2Q9NPC8 291 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 TMEM51Q9NW97 253 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 DNAJC12Q9UKB3 198 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 HS3ST2Q9Y278 367 aa23.37■■□□□ 1.33
USP42-205ENST00000465073 A0A087WV48 116 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 PRAMEF26H0Y7S4 382 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 CLCN1P35523 988 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 GGCXP38435 758 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 CXCR3P49682 368 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 BPIFB4P59827 614 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 CCDC15Q0P6D6 951 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 CAMK4Q16566 473 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 POM121L1PQ3SYA9 428 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 SLC47A2Q86VL8 602 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 MLKLQ8NB16 471 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 C2orf49Q9BVC5 232 aaPredicted RBP23.36■■□□□ 1.33
USP42-205ENST00000465073 PIGVQ9NUD9 493 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 ARHGEF38Q9NXL2 777 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.36■■□□□ 1.33
USP42-205ENST00000465073 AJAP1Q9UKB5 411 aaPredicted RBP23.36■■□□□ 1.33
USP42-205ENST00000465073 LAMA5O15230 3695 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 RNGTTO60942 597 aaKnown RBP23.36■■□□□ 1.33
USP42-205ENST00000465073 ADCY5O95622 1261 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 F9P00740 461 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 ILKQ13418 452 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 KANSL1Q7Z3B3 1105 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 FAM71AQ8IYT1 594 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 NXPE2Q96DL1 559 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 LRIG1Q96JA1 1093 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 CCDC114Q96M63 670 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 TKTL2Q9H0I9 626 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 STAP1Q9ULZ2 295 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 PAXBP1Q9Y5B6 917 aa23.36■■□□□ 1.33
USP42-205ENST00000465073 NYNRINQ9P2P1 1898 aaKnown RBP23.35■■□□□ 1.33
USP42-205ENST00000465073 BNIP3LO60238 219 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 CNTN5O94779 1100 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 RHOCP08134 193 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 SRCP12931 536 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 SOWAHCQ53LP3 525 aaPredicted RBP23.35■■□□□ 1.33
USP42-205ENST00000465073 C6orf118Q5T5N4 469 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 ACBD5Q5T8D3 534 aaPredicted RBP23.35■■□□□ 1.33
USP42-205ENST00000465073 OTUD1Q5VV17 481 aaPredicted RBP23.35■■□□□ 1.33
USP42-205ENST00000465073 NEK5Q6P3R8 708 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 SETD3Q86TU7 594 aaPredicted RBP23.35■■□□□ 1.33
USP42-205ENST00000465073 ATP11CQ8NB49 1132 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 TMEM35BQ8NCS4 154 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 NT5C3BQ969T7 300 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 PGAP3Q96FM1 320 aaPredicted RBP23.35■■□□□ 1.33
USP42-205ENST00000465073 KLHDC7BQ96G42 594 aa23.35■■□□□ 1.33
USP42-205ENST00000465073 IGSF10Q6WRI0 2623 aa23.34■■□□□ 1.33
USP42-205ENST00000465073 TP53BP1Q12888 1972 aaPredicted RBP23.34■■□□□ 1.33
USP42-205ENST00000465073 MT-CO1P00395 513 aa23.34■■□□□ 1.33
USP42-205ENST00000465073 CKMT2P17540 419 aa23.34■■□□□ 1.33
USP42-205ENST00000465073 TAS2R38P59533 333 aa23.34■■□□□ 1.33
USP42-205ENST00000465073 RNASE9P60153 205 aaKnown RBP23.34■■□□□ 1.33
USP42-205ENST00000465073 UBE2HP62256 183 aa23.34■■□□□ 1.33
USP42-205ENST00000465073 MAN2A1Q16706 1144 aa23.34■■□□□ 1.33
USP42-205ENST00000465073 TPD52L1Q16890 204 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms