RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PRLRP16471 622 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 GPD2P43304 727 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 PMS1P54277 932 aaKnown RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 KCNMA1Q12791 1236 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 CETN1Q12798 172 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 PNOCQ13519 176 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 COBLL1Q53SF7 1204 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 ZNF658Q5TYW1 1059 aaPredicted RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 CDCP2Q5VXM1 449 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 CXorf57Q6NSI4 855 aaKnown RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 KCNE4Q8WWG9 221 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 RNF34Q969K3 372 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 WBP1Q96G27 269 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 PRMT1Q99873 361 aaKnown RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 SCAND2PQ9GZW5 306 aaPredicted RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 FAM204AQ9H8W3 233 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 METTL14Q9HCE5 456 aaKnown RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 CPNE5Q9HCH3 593 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 KLHL11Q9NVR0 708 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.02■□□□□ -0
MCF2L-220ENST00000464800 PMM2O15305 246 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 SLC31A1O15431 190 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 BNIP3LO60238 219 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 USP12O75317 370 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 CSO75390 466 aaKnown RBP15.01□□□□□ -0.01
MCF2L-220ENST00000464800 PIAS2O75928 621 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 GP1BAP07359 652 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 SLC2A3P11169 496 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 AKT2P31751 481 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 LSSP48449 732 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 TAS2R38P59533 333 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 ERVPABLB-1P60509 514 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 YWHAZP63104 245 aaKnown RBP15.01□□□□□ -0.01
MCF2L-220ENST00000464800 GCNT1Q02742 428 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 CENPCQ03188 943 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 DLG2Q15700 870 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 PIP5KL1Q5T9C9 394 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 ARHGAP40Q5TG30 622 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 RRAGAQ7L523 313 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 STK32AQ8WU08 396 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 RPRD1AQ96P16 312 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-220ENST00000464800 CALN1Q9BXU9 219 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 POLR1BQ9H9Y6 1135 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 EVA1BQ9NVM1 165 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 NLGN3Q9NZ94 848 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 VPS28Q9UK41 221 aa15.01□□□□□ -0.01
MCF2L-220ENST00000464800 ATMQ13315 3056 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 COL27A1Q8IZC6 1860 aaPredicted RBP15□□□□□ -0.01
MCF2L-220ENST00000464800 A0A1W2PQU0 124 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 E5RJQ4 531 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 HNRNPA2B1P22626 353 aaKnown RBP15□□□□□ -0.01
MCF2L-220ENST00000464800 CCR1P32246 355 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 PITX1P78337 314 aaPredicted RBP15□□□□□ -0.01
MCF2L-220ENST00000464800 CCDC15Q0P6D6 951 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 CCDC40Q4G0X9 1142 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 NEK5Q6P3R8 708 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 DENND1BQ6P3S1 775 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 ARHGEF19Q8IW93 802 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 SH2D3CQ8N5H7 860 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 OR13H1Q8NG92 308 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 KLK6Q92876 244 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 ALG14Q96F25 216 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 APOLD1Q96LR9 279 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 CCDC114Q96M63 670 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 GSDMAQ96QA5 445 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 MED15Q96RN5 788 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 FEM1AQ9BSK4 669 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 SLC4A5Q9BY07 1137 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 ABCG4Q9H172 646 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 THAP9Q9H5L6 903 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 USP29Q9HBJ7 922 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 FZD3Q9NPG1 666 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 THSD1Q9NS62 852 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 FARP1Q9Y4F1 1045 aaPredicted RBP15□□□□□ -0.01
MCF2L-220ENST00000464800 ATP6V1DQ9Y5K8 247 aa15□□□□□ -0.01
MCF2L-220ENST00000464800 SYNJ2BP-COX16A0A087WUM0 186 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-220ENST00000464800 NEMP2A6NFY4 417 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 KPNA3O00505 521 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-220ENST00000464800 P4HA2O15460 535 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 KLK10O43240 276 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 MED7O43513 233 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 GIMD1P0DJR0 217 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 KRT5P13647 590 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 DUSP3P51452 185 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-220ENST00000464800 ZNF177Q13360 481 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-220ENST00000464800 EIF4EBP2Q13542 120 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-220ENST00000464800 MEA1Q16626 185 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 ZNF284Q2VY69 593 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 FBXL22Q6P050 247 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 HORMAD1Q86X24 394 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 OR52K2Q8NGK3 314 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 LMO3Q8TAP4 145 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 IFT43Q96FT9 208 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 DUSP23Q9BVJ7 150 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 DPH1Q9BZG8 443 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 DYRK4Q9NR20 520 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 DDIT4Q9NX09 232 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 COX16Q9P0S2 106 aa14.99□□□□□ -0.01
MCF2L-220ENST00000464800 MYO18BQ8IUG5 2567 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms