RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 IL21RQ9HBE5 538 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 FANCLQ9NW38 375 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 TAB2Q9NYJ8 693 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 LIMA1Q9UHB6 759 aaKnown RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 HS3ST2Q9Y278 367 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 FNDC3AQ9Y2H6 1198 aaKnown RBP9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SIK3Q9Y2K2 1263 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 SNX11Q9Y5W9 270 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 NUMA1Q14980 2115 aa9.41□□□□□ -0.9
BRCA1-207ENST00000461798 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 TMEM8BA6NDV4 472 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 FLRT2O43155 660 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 LATO43561 262 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 HYAL3O43820 417 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-207ENST00000461798 PCDHGA12O60330 932 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 CNTN5O94779 1100 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 DKK1O94907 266 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 IL1BP01584 269 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 MMEP08473 750 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 SPINK2P20155 84 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 DRD3P35462 400 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 SOX5P35711 763 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 NUDT1P36639 197 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 PSMD8P48556 350 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 COPB1P53618 953 aaKnown RBP9.4□□□□□ -0.9
BRCA1-207ENST00000461798 KRT83P78385 493 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 ALFQ53S48 1182 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 FKBP15Q5T1M5 1219 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 TRNP1Q6NT89 227 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 UNQ6494/PRO21346Q6UXR6 183 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 LRRC31Q6UY01 552 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF783Q6ZMS7 281 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 TRIM72Q6ZMU5 477 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 DSG4Q86SJ6 1040 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 SH2D3CQ8N5H7 860 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 OR8D1Q8WZ84 308 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 SNX19Q92543 992 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 WNT2BQ93097 391 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 PSMB7Q99436 277 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 CDC6Q99741 560 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 C2orf49Q9BVC5 232 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-207ENST00000461798 RETREG1Q9H6L5 497 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 ANO10Q9NW15 660 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 ZNF212Q9UDV6 495 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 SLC25A13Q9UJS0 675 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 VPS28Q9UK41 221 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 USP24Q9UPU5 2620 aa9.4□□□□□ -0.9
BRCA1-207ENST00000461798 CABIN1Q9Y6J0 2220 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 A0A1W2PR77 199 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 ILVBLA1L0T0 632 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 H0Y8X5 98 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 EPHB6O15197 1021 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 KRT37O76014 449 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 GFPT2O94808 682 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 MT-CO1P00395 513 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 TPM2P07951 284 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 FTH1P19P0C7X4 201 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 C1QTNF9P0C862 333 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SRCP12931 536 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 UNGP13051 313 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 VAV1P15498 845 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 ZNF18P17022 549 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 GGCXP38435 758 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 STAT1P42224 750 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 KLK7P49862 253 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 ADPRHP54922 357 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 GSCP56915 257 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 POLR2FP61218 127 aaKnown RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 FMO1Q01740 532 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 NRG1Q02297 640 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SLC20A2Q08357 652 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 PTP4A2Q12974 167 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 C2CD6Q53TS8 623 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 KCNT1Q5JUK3 1230 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 NAA35Q5VZE5 725 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 LRSAM1Q6UWE0 723 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 APTXQ7Z2E3 356 aaKnown RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SLCO6A1Q86UG4 719 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 CHCHD4Q8N4Q1 142 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 TMIEQ8NEW7 156 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SETD7Q8WTS6 366 aaKnown RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SLC20A1Q8WUM9 679 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 CENPIQ92674 756 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SKA1Q96BD8 255 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 ACE2Q9BYF1 805 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 FAM207AQ9NSI2 230 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 PPARGC1AQ9UBK2 798 aaKnown RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SARDHQ9UL12 918 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 APOBEC2Q9Y235 224 aaKnown RBP9.39□□□□□ -0.91
BRCA1-207ENST00000461798 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 ADAMTS9Q9P2N4 1935 aa9.39□□□□□ -0.91
BRCA1-207ENST00000461798 A0A0D9SEW6 157 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms