RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 FTSJ1Q9UET6 329 aa9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 VANGL2Q9ULK5 521 aa9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 PPM1HQ9ULR3 514 aa9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 TPX2Q9ULW0 747 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 PCDHGA10Q9Y5H3 936 aa9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 ATRXP46100 2492 aa9.04□□□□□ -0.96
SOX2-OT-202ENST00000461063 IGSF10Q6WRI0 2623 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 KNL1Q8NG31 2342 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 I6L893 689 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 M0QYT0 321 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 TLR4O00206 839 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SLC7A4O43246 635 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 RTN2O75298 545 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 CLDN11O75508 207 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 CNTN5O94779 1100 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 ADCY5O95622 1261 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 TFE3P19532 575 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SNX16P57768 344 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 NXPH1P58417 271 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 CNTN1Q12860 1018 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 ZNF177Q13360 481 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 DLG2Q15700 870 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SMAD1Q15797 465 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 MAN2A1Q16706 1144 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 ACCSLQ4AC99 568 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 CCDC157Q569K6 752 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 FAM46CQ5VWP2 391 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 NAPEPLDQ6IQ20 393 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 Q6ZVU0 165 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 DSG4Q86SJ6 1040 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 GALNT15Q8N3T1 639 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SAP25Q8TEE9 199 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 OR8D1Q8WZ84 308 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 NT5C3BQ969T7 300 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 PPP1R9BQ96SB3 815 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 NPY6RQ99463 290 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SIK2Q9H0K1 926 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 NDST4Q9H3R1 872 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SYNCQ9H7C4 482 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 ANLNQ9NQW6 1124 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 ARHGAP20Q9P2F6 1191 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 SLC25A13Q9UJS0 675 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 VPS28Q9UK41 221 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 TBC1D30Q9Y2I9 924 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 LOC400499M0QZD8 3231 aa9.03□□□□□ -0.96
SOX2-OT-202ENST00000461063 CACNA1GO43497 2377 aa9.02□□□□□ -0.96
SOX2-OT-202ENST00000461063 FAM149AA5PLN7 773 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 TRABD2BA6NFA1 517 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 CBX4O00257 560 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 MCF2LO15068 1137 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ALOX15BO15296 676 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 PLRG1O43660 514 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 MT-CO1P00395 513 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ITGAVP06756 1048 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 SRCP12931 536 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ZNF18P17022 549 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 EPHA8P29322 1005 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 MAT2AP31153 395 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 GABRB2P47870 512 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 RXRGP48443 463 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 CXCR3P49682 368 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 CDH4P55283 916 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 BPIFB4P59827 614 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 TPD52L1Q16890 204 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 POM121L1PQ3SYA9 428 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 VWA3BQ502W6 1294 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ALFQ53S48 1182 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 MIIPQ5JXC2 388 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 BRMS1LQ5PSV4 323 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ARTNQ5T4W7 220 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 AGBL4Q5VU57 503 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 C19orf48Q6RUI8 117 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 DHRS13Q6UX07 377 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 IQCHQ86VS3 1027 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 SPATS2Q86XZ4 545 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ZDHHC17Q8IUH5 632 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ZNF683Q8IZ20 524 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 MFSD2AQ8NA29 543 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 TMEM35BQ8NCS4 154 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 PIP4K2CQ8TBX8 421 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 PGAP3Q96FM1 320 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 PSMB7Q99436 277 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 TUBGCP2Q9BSJ2 902 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 TKTL2Q9H0I9 626 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 MUC3BQ9H195 1237 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 WDCPQ9H6R7 721 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ERVMER34-1Q9H9K5 563 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 ARHGEF38Q9NXL2 777 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 RRN3Q9NYV6 651 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 DKK4Q9UBT3 224 aa9.02□□□□□ -0.97
SOX2-OT-202ENST00000461063 DMTF1Q9Y222 760 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms