RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SUPT7LO94864 414 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 ARP10275 920 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 PTGS2P35354 604 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 TCF7P36402 384 aaPredicted RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 MAGEA8P43361 318 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 MMP13P45452 471 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 RIPOR1Q6ZS17 1223 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 MIER2Q8N344 545 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 ARL10Q8N8L6 244 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 SLC30A5Q8TAD4 765 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 TP53INP1Q96A56 240 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 SRPK1Q96SB4 655 aaKnown RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 MTG1Q9BT17 334 aaPredicted RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 AP4B1Q9Y6B7 739 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 MYH8P13535 1937 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 H3BMM5 538 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 DDX3XO00571 662 aaKnown RBP eCLIP9.92□□□□□ -0.828e-13■■□□□ 11.7
UFD1-205ENST00000459854 CCNKO75909 580 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 CCNE2O96020 404 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 ETS1P14921 441 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 IFNGR2P38484 337 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 AKR1D1P51857 326 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 SPOUT1Q5T280 376 aaKnown RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 ATG14Q6ZNE5 492 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 TMEM110Q86TL2 294 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 TSEN2Q8NCE0 465 aaKnown RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 REPS2Q8NFH8 660 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 BTN2A2Q8WVV5 523 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 REEP2Q9BRK0 252 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 PDCD10Q9BUL8 212 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 WDR41Q9HAD4 459 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 ARHGAP20Q9P2F6 1191 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 PCYOX1Q9UHG3 505 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 TRMT6Q9UJA5 497 aaKnown RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 ADAM28Q9UKQ2 775 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 RPS6KL1Q9Y6S9 549 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 BAZ2BQ9UIF8 2168 aaKnown RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 IRGMA1A4Y4 181 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 ECDO95905 644 aaPredicted RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 INHAP05111 366 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 CYP2C9P11712 490 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 RPA1P27694 616 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 FSCN1Q16658 493 aaKnown RBP9.92□□□□□ -0.82
UFD1-205ENST00000459854 SPANXN3Q5MJ09 141 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 EGFLAMQ63HQ2 1017 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 BTN2A1Q7KYR7 527 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 STRA8Q7Z7C7 330 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 UBE2Q1Q7Z7E8 422 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 RAB43Q86YS6 212 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 PXYLP1Q8TE99 480 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 MAGEE1Q9HCI5 957 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 ADPRHL2Q9NX46 363 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
UFD1-205ENST00000459854 LAMB1P07942 1786 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 LINC00854A0A1B0GVQ3 168 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SEPT4O43236 478 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 AP5Z1O43299 807 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SMNDC1O75940 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
UFD1-205ENST00000459854 DHFRP00374 187 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 HSMCR30P0CW71 290 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 PTPN7P35236 360 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 NCOA4Q13772 614 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SQLEQ14534 574 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 DUSP28Q4G0W2 176 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 RNF219Q5W0B1 726 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 LIN54Q6MZP7 749 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SPOCD1Q6ZMY3 1216 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 STK32CQ86UX6 486 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 PM20D2Q8IYS1 436 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 BHLHE22Q8NFJ8 381 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 PIWIL2Q8TC59 973 aaKnown RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 DQX1Q8TE96 717 aaKnown RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 AFG1LQ8WV93 481 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 INPP4AQ96PE3 977 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 ZIC5Q96T25 663 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SPATA16Q9BXB7 569 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 TMEM165Q9HC07 324 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 KBTBD4Q9NVX7 518 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 ADAMTSL1Q8N6G6 1762 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 NFASCO94856 1347 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 CYP3A7-CYP3A51PA0A087WV96 503 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 NPHP3-ACAD11A0A0J9YXS1 232 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 EXTL3O43909 919 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 KRT36O76013 467 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 PROCP04070 461 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 LYNP07948 512 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 TSPAN19P0C672 248 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SUPT20HL2P0C7V6 817 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 CYP3A7P24462 503 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 BNIP1Q12981 228 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 ZC2HC1CQ53FD0 456 aaPredicted RBP9.91□□□□□ -0.82
UFD1-205ENST00000459854 COBLL1Q53SF7 1204 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 STX12Q86Y82 276 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 SHCBP1LQ9BZQ2 653 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 STARD7Q9NQZ5 370 aa9.91□□□□□ -0.82
UFD1-205ENST00000459854 ENTPD7Q9NQZ7 604 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms